scAtria single-cell spatial atlas resource

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Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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Sample Organ Disease state Technique Cells Spatial module Curation
BrainTumor_36725935__IMC__Glioma_119C1 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 981 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_119C2 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 933 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_120C1 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 4,176 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_120C2 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 3,730 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_121C BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 2,616 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_122C1 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 1,528 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_122C2 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 2,873 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_123C1 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 3,906 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_123C2 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 1,586 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_123C3 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 1,790 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_124C1 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 4,543 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_124C2 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 4,469 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_125C1 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 3,776 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_125C2 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 3,824 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_126C1 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 2,687 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_126C2 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 2,493 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_127C BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 2,600 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_128C1 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 3,339 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_128C2 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 4,018 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_128N BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 845 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_129C1 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 2,117 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_129C2 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 3,019 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_130C1 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 2,355 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_130C2 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 2,753 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_131C1 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 3,307 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_131C2 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 3,450 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_132C1 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 2,669 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_132C2 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 2,893 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_133C BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 4,827 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_134C1 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 1,806 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_134C2 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 3,604 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_135C1 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 2,379 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_135C2 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 3,072 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_136C BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 1,156 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_137C1 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 2,092 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_137C2 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 1,062 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_138C1 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 1,861 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_138C2 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 1,445 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_139C1 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 3,533 T1T2T3T1T2T3T1T2T3 Curated
BrainTumor_36725935__IMC__Glioma_139C2 BrainTumor_36725935 · IMC / Imaging Mass Cytometry Brain Primary cancer IMC 3,850 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_0_X1Y1__gate106 BRCA_31959985 · IMC / Imaging Mass Cytometry Liver Healthy/control IMC 184 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_0_X2Y1__gate107 BRCA_31959985 · IMC / Imaging Mass Cytometry Liver Healthy/control IMC 1,914 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_100_X15Y5__gate014 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 3,558 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_101_X10Y8__gate055 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 3,433 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_104_X7Y4__gate064 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 490 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_104_X8Y4__gate069 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 1,841 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_104_X8Y4__gate101 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 2,046 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_106_X2Y9__gate123 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,423 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_112_X5Y8__gate118 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,927 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_114_X13Y4__gate005 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,706 T1T2T3T1T2T3T1T2T3 Curated