Collections
4
Core manifests
Sample and dataset metadata used by Browse and dataset pages.
| File | Format | Updated | Size | Rows | Download |
|---|---|---|---|---|---|
| Browse sample manifest Generated CSV Enriched sample-level manifest with dataset, organ, disease, technique, DEG, and spatial availability fields. Generated on request from Browse data and current manifests. | CSV | 2026-06-25 17:22:27 CST | 4.6 MB | Generated | Download |
| Sample disease verdict Current Current public sample-level disease, organ, and metastasis verdict manifest. | TSV | 2026-06-25 17:22:27 CST | 1.7 MB | 8,295 | Download |
| Dataset disease summary Current Dataset-level disease and organ summary derived from sample-level verdicts. | TSV | 2026-06-25 17:22:27 CST | 26.8 KB | 98 | Download |
Spatial results
Published static bundle for Domains, Interaction Propensity, and Network Topology.
| File | Format | Updated | Size | Rows | Download |
|---|---|---|---|---|---|
| Spatial sample manifest Mapped bundle Per-sample spatial readiness, graph construction, and mapped disease/organ context. Endpoint enriches disease fields at download time. | CSV | 2026-06-25 14:14:28 CST | 2.8 MB | Generated | Download |
| Sample graph manifest Graph availability and geometry metadata for spatial samples. | CSV | 2026-06-24 22:42:19 CST | 2.1 MB | Generated | Download |
| Domain summary Sample-level spatial domain counts and composition summaries. | CSV | 2026-06-24 22:44:38 CST | 21.0 MB | Generated | Download |
| Domain composition Cell-type composition of inferred Domains. | CSV | 2026-06-24 22:44:47 CST | 68.9 MB | Generated | Download |
| Domain interfaces and mixing Domain boundary summaries and mixing metrics for tissue architecture review. Primary link opens mixing metrics; interface summaries are available from module pages. | CSV | 2026-06-24 22:45:00 CST | 91.9 MB | Generated | Download |
| Interaction pair summary Pair-level interaction propensity summaries across published samples. | CSV | 2026-06-24 22:43:26 CST | 541.5 MB | Generated | Download |
| Interaction direction summary Directed interaction summaries when directionality is available. | CSV | 2026-06-24 22:44:03 CST | 266.7 MB | Generated | Download |
| Network topology summary Node, edge, and neighborhood topology summaries for spatial cell graphs. | CSV | 2026-06-24 22:44:33 CST | 4.3 MB | Generated | Download |
| Network node and edge summaries Cell-type node/edge statistics behind the Network Topology explorer. Primary link opens node summary; edge summary is available from module pages. | CSV | 2026-06-24 22:44:32 CST | 182.3 MB | Generated | Download |
DEG and marker outputs
Public DEG/marker manifests and curated Seurat FindAllMarkers output indexes.
| File | Format | Updated | Size | Rows | Download |
|---|---|---|---|---|---|
| Default DEG run manifest Default Dataset-level status, feature availability, label tier, and output paths for the default public marker bundle. | CSV | 2026-06-22 20:37:05 CST | 74.7 KB | 109 | Download |
| Small feature-ready DEG run manifest Audit Earlier feature-ready marker run manifest retained for audit and comparison. | CSV | 2026-06-22 16:30:49 CST | 59.0 KB | 100 | Download |
Benchmark outputs
Interaction-engine comparison tables retained for methods validation.
| File | Format | Updated | Size | Rows | Download |
|---|---|---|---|---|---|
| Interaction benchmark run manifest Run-level benchmark table for multi-engine interaction analyses. | CSV | 2026-06-15 10:37:31 CST | 2.1 MB | Generated | Download |
| Interaction benchmark pair table Long-form pair-level benchmark output. | CSV | 2026-06-15 10:37:01 CST | 168.1 MB | Generated | Download |
| Interaction benchmark direction table Long-form direction-level benchmark output. | CSV | 2026-06-15 10:37:30 CST | 49.9 MB | Generated | Download |