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single-cell spatial atlas resource
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Browse is the search page: type a query, then refine by organ, technique, modality, curation, and dataset/sample view.
Dataset
Sample
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Table
7,730 Samples
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Study ID
HNSCC_41616773
Modality
Spatial transcriptomics
Technique
Xenium
Organ
breast
Disease state
primary cancer
Disease detail
breast cancer
Filter scope
7,730 matches · sample view
Applied
Dataset
ASD_42288509 · MERFISH / MERSCOPE
10x Genomics Atera showcase
B-NHL_38379051 · PCF / CODEX / PhenoCycler Fusion
BoneMarrow_38714197 · PCF / CODEX / PhenoCycler Fusion
BrainTumor_36725935 · IMC / Imaging Mass Cytometry
BRCA_31959985 · IMC / Imaging Mass Cytometry
BRCA_35063072 · MIBI-TOF / Multiplexed Ion Beam Imaging
BRCA_35122013 · IMC / Imaging Mass Cytometry
CastlemanDisease_40593805 · Xenium
CervicalCancer_CmTSA_41807362
cHL_41923627 · CosMx SMI / NanoString SMI
cHL_41923627 · MIBI-TOF / Multiplexed Ion Beam Imaging
cHL_41923627 · PCF / CODEX / PhenoCycler Fusion
CML_41592325 · PCF / CODEX / PhenoCycler Fusion
Bruker CosMx 1k FFPE showcase
Bruker CosMx 64-protein FFPE showcase
Bruker CosMx 6k FFPE showcase
Bruker CosMx WTx FFPE showcase
CRC_32763154 · PCF / CODEX / PhenoCycler Fusion
CRC_40189697 · IMC / Imaging Mass Cytometry
CRC_41986711 · CosMx SMI / NanoString SMI
CRC_42167227 · CosMx SMI / NanoString SMI
CutaneousLeishmaniasis_40371647 · CosMx SMI / NanoString SMI
DevelopingLung_39477961 · PCF / CODEX / PhenoCycler Fusion
DKD_42056516 · CosMx SMI / NanoString SMI
DKD_42056516 · Xenium
DLBCL_41120574 · CosMx SMI / NanoString SMI
DLBCL_41874448 · CosMx SMI / NanoString SMI
DLBCL_41874448 · PCF / CODEX / PhenoCycler Fusion
GBM_40972572 · CosMx SMI Protein
HCC_39304772 · PCF / CODEX / PhenoCycler Fusion
HCC_39327501 · PCF / CODEX / PhenoCycler Fusion
HCC_39455893 · IMC / Imaging Mass Cytometry
HCC_39965889 · PCF / CODEX / PhenoCycler Fusion
LiverCancer_41723121 HCC cohort · CosMx SMI / NanoString SMI
HGSC_39179931 · CosMx SMI / NanoString SMI
HGSC_39179931 · MERFISH / MERSCOPE
HGSC_39179931 · Xenium
HGSOC_38570491 · CosMx SMI / NanoString SMI
HNSCC_41616773 · Other ST
HNSCC_41616773 PCF discovery cohort
HNSCC_41616773 PCF healthy lymph node cohort
HNSCC_41616773 PCF validation cohort
IBD_42049732 · CosMx SMI / NanoString SMI
LiverCancer_41723121 iCCA cohort · CosMx SMI / NanoString SMI
IgAN_38898271 · Xenium
Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion
Intestine_39843748 · MERFISH / MERSCOPE
Intestine_39843748 · Xenium
Liver_41986723 · MERFISH / MERSCOPE
LUAD_36725934 · IMC / Imaging Mass Cytometry
Melanoma_35363543 · IMC / Imaging Mass Cytometry
Melanoma_40148341 · CosMx SMI / NanoString SMI
Melanoma_40457060 · CosMx SMI / NanoString SMI
Melanoma_41916292 · CyCIF / Cyclic IF
MERFISH 500-plex Vizgen showcase
MERFISH 815-plex Vizgen showcase
MERFISH 960-plex Vizgen showcase
MIBC_42126225 · Xenium
Neocortex_39779846 · MERFISH / MERSCOPE
Neuroblastoma_41918107 · PCF / CODEX / PhenoCycler Fusion
NormalSkin_41872488 · MERFISH / MERSCOPE
NSCLC_38242124 · IMC / Imaging Mass Cytometry
NSCLC_40220761 · CosMx SMI / NanoString SMI
NSCLC_40408481 · PCF / CODEX / PhenoCycler Fusion
Oral_41663813 · Xenium
OSCC_41707652 · IMC / Imaging Mass Cytometry
PDAC_39227743 · CosMx SMI / NanoString SMI
PDAC_40269162 · CosMx SMI / NanoString SMI
PDAC_41916312 · Xenium
PulmonaryFibrosis_39901013 · Xenium
RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI
SCN_41720090 · MERFISH / MERSCOPE
SCN_41720090 · Visium HD
SPATCH_41107232 · CosMx SMI / NanoString SMI
SPATCH_41107232 · PCF / CODEX / PhenoCycler Fusion
SPATCH_41107232 · Stereo-seq / Stereo-seq Spatial Transcriptomics
SPATCH_41107232 · Xenium
SpinalCord_38513664 · ISS / In Situ Sequencing
SpinalCord_38513664 · Xenium
TNBC_38194915 · PCF / CODEX / PhenoCycler Fusion
UlcerativeColitis_38374043 CosMx 960-plex Run 1
UlcerativeColitis_38374043 CosMx 1000-plex Run 2 Longitudinal
10x Genomics Visium HD showcase
10x Genomics Visium HD p2 TissueArray showcase
10x Genomics Visium HD p2 TMA showcase
10x Genomics Visium HD p2 WholeSlide showcase
10x Genomics Xenium Prime 5K showcase
Xenium Human Brain Gene Expression Panel showcase
Xenium Human Breast Gene Expression Panel 10x Genomics showcase
Xenium Human Breast Gene Expression Panel bioRxiv biomarker showcase
Xenium Human Immuno-Oncology Profiling Panel showcase
Xenium Human Lung Gene Expression Panel showcase
Xenium Human Multi-Tissue and Cancer Panel showcase
Organ
Brain (492)
Spinal cord (58)
Head and neck (336)
Lymphoid tissue (450)
Musculoskeletal (61)
Skin (242)
Breast (1,099)
Lung (2,814)
Liver (515)
Adrenal gland (24)
Kidney (70)
Bladder (5)
Pancreas (116)
Small intestine (57)
Large intestine (851)
Ovary (223)
Prostate (4)
Uterus/Cervix (7)
Bone marrow (90)
Heart (2)
Disease state
Healthy/control (594)
Primary cancer (6,368)
Metastatic cancer (346)
Non-cancer disease (422)
Disease detail
Acute lymphoid leukemia (1)
Acute myeloid leukemia (5)
Adenosquamous lung carcinoma (60)
Alzheimer's disease (1)
Astrocytoma (Primary) (20)
Astrocytoma (Progression from grade II/III) (2)
Astrocytoma (Recurrent) (6)
Autism spectrum disorder cortical organoid model (71)
B-cell non-Hodgkin lymphoma (35)
Brain metastasis
Brain metastasis from Bladder/urinary tract
Brain metastasis from Breast (29)
Brain metastasis from extremity (1)
Brain metastasis from Intestine
Brain metastasis from Lung (53)
Brain metastasis from Ovary/Fallopian tube
Brain metastasis from Skin (19)
Brain metastasis from Stomach/upper GI (3)
Brain metastasis from trunk (1)
Breast cancer (883)
Breast cancer (CCH/DCIS, ER+/PR+/HER2-1+) (1)
Breast cancer (DCIS, ER+/PR+/HER2-2+) (2)
Breast cancer (DCIS, ER-/PR-/HER2-2+) (1)
Breast cancer (DCIS, HER2-1+) (2)
Breast cancer (DCIS, HER2-2+) (1)
Breast cancer (DCIS, HER2-3+) (1)
Breast cancer (ductal carcinoma in situ) (59)
Breast cancer (ductal carcinoma in situ, HER2-1+) (1)
Breast cancer (IDC, ER+/PR+/HER2-1+) (1)
Breast cancer (IDC, ER+/PR+/HER2-2+) (1)
Breast cancer (IDC, HER2-) (1)
Breast cancer (invasive ductal carcinoma) (12)
Breast cancer (invasive ductal carcinoma, ductal carcinoma in situ) (2)
Breast cancer (invasive lobular carcinoma) (6)
Castleman disease (18)
Cervical Cancer (1)
Cervical cancer (2)
Cervical cancer (squamous cell carcinoma) (1)
Chronic myeloid leukemia bone marrow (55)
Classical Hodgkin lymphoma (79)
Colorectal cancer (682)
Colorectal cancer (adenocarcinoma) (13)
Cutaneous leishmaniasis (4)
Developing healthy lung (5)
Diffuse large B-cell lymphoma (92)
Experimental autoimmune encephalomyelitis (multiple sclerosis model) (52)
Follicular lymphoid hyperplasia (1)
Glioblastoma (6)
Glioblastoma (Primary) (209)
Glioblastoma (Progression from grade II/III) (3)
Glioblastoma (Recurrent) (16)
Glioblastoma (Residual) (2)
Glioma, IDH status unknown (Primary) (12)
Head and neck squamous cell carcinoma (277)
Healthy/control kidney (15)
Healthy/control lung (10)
Healthy/normal skin (114)
Healthy adult human intestine (66)
Healthy colon control (31)
Healthy human (14)
Healthy intestine (18)
Hepatocellular carcinoma (500)
High-grade serous carcinoma (204)
IgA nephropathy (1)
Inflammatory bowel disease (34)
Intrahepatic cholangiocarcinoma (6)
Kidney cancer (1)
Kidney cancer (papillary renal cell carcinoma) (1)
Kidney cancer (renal cell carcinoma) (1)
Kidney disease (AA amyloid) (2)
Kidney disease (C3GN) (1)
Kidney disease (CKD) (1)
Kidney disease (DKD) (29)
Kidney disease (DKD+FSGS) (1)
Kidney disease (DM) (6)
Kidney disease (DM/HTN) (4)
Kidney disease (FSGS) (1)
Kidney disease (HTN) (1)
Kidney disease (IgA) (1)
Kidney disease (MN) (1)
Kidney disease (TMA) (1)
Large-cell/other non-small cell lung cancer (15)
Lung adenocarcinoma (1,413)
Lung cancer (4)
Lung cancer (invasive acinar adenocarcinoma) (6)
Lung cancer (invasive adenocarcinoma) (1)
Lung squamous cell carcinoma (137)
Lymphoid tissue metastasis
Lymphoid tissue metastasis from acral (1)
Lymphoid tissue metastasis from extremity (3)
Lymphoid tissue metastasis from head/neck (1)
Lymphoid tissue metastasis from Oral cavity
Lymphoid tissue metastasis from trunk (2)
Melanocytic nevus / non-malignant skin control (12)
Melanoma (92)
Multiple sclerosis (4)
Muscle-invasive bladder cancer (5)
Neuroblastoma (24)
Non-small cell lung cancer (1,114)
Normal/healthy bone marrow control (27)
Normal/healthy breast tissue control (97)
Normal/healthy heart control (1)
Normal/healthy hippocampus brain tissue (1)
Normal/healthy kidney control (1)
Normal/healthy liver control (6)
Normal/healthy pancreas control (3)
Normal/healthy suprachiasmatic nucleus brain tissue (2)
Normal/healthy tonsil control (1)
Normal brain cortex (1)
Normal developing human neocortex (6)
Oral health (15)
Oral squamous cell carcinoma (92)
Organ-specific lymph-node control/no cancer (142)
Organ-specific spinal-cord control/no cancer (2)
Other non-small cell lung cancer (13)
Ovarian cancer (10)
Ovarian cancer (adenocarcinoma) (1)
Ovarian cancer (clear cell adenocarcinoma) (1)
Ovarian cancer (papillary serous carcinoma) (7)
Pancreatic cancer (1)
Pancreatic ductal adenocarcinoma (110)
Periodontitis (29)
Prostate cancer (2)
Prostate cancer (adenocarcinoma) (2)
Pulmonary fibrosis / interstitial lung disease (cHP) (4)
Pulmonary fibrosis / interstitial lung disease (CPFE) (1)
Pulmonary fibrosis / interstitial lung disease (CTD-ILD) (2)
Pulmonary fibrosis / interstitial lung disease (ILD) (6)
Pulmonary fibrosis / interstitial lung disease (IPAF) (2)
Pulmonary fibrosis / interstitial lung disease (IPF) (16)
Pulmonary fibrosis / interstitial lung disease (NSIP) (2)
Pulmonary fibrosis / interstitial lung disease (Sarcoidosis) (2)
Reactive Follicular Hyperplasia (1)
Reactive follicular hyperplasia (1)
Reactive lymph node (1)
Rheumatoid arthritis (active) (36)
Rheumatoid arthritis (remission) (24)
Skin cancer (1)
Skin metastasis
Skin metastasis from extremity (1)
Skin metastasis from head/neck (2)
Skin metastasis from trunk (1)
Triple-negative breast cancer (27)
Ulcerative colitis (4)
Ulcerative colitis (post-vedolizumab, non-responder) (8)
Ulcerative colitis (post-vedolizumab, responder) (10)
Ulcerative colitis (pre-vedolizumab, non-responder) (7)
Ulcerative colitis (pre-vedolizumab, responder) (25)
Ulcerative colitis (vedolizumab-treated) (5)
Uterine cancer (3)
Technique
Atera (1)
CmTSA (1)
CosMx SMI / NanoString SMI (24)
CosMx SMI Protein (2)
CyCIF / Cyclic IF (1)
IMC / Imaging Mass Cytometry (9)
ISS / In Situ Sequencing (1)
MERFISH / MERSCOPE (10)
MIBI-TOF / Multiplexed Ion Beam Imaging (2)
Other ST (1)
PCF / CODEX / PhenoCycler Fusion (18)
Stereo-seq / Stereo-seq Spatial Transcriptomics (1)
Visium HD (5)
Xenium (18)
Modality
Spatial proteomics (33)
Spatial transcriptomics (61)
Sample
Atera_10xGenomics__Atera__WTA_Preview_FFPE_Breast_Cancer
Atera_10xGenomics__Atera__WTA_Preview_FFPE_Cervical_Cancer
VisiumHD_p2_TissueArray__Visium_HD__Visium_HD_11mm_Human_TA_Breast_Cancer
VisiumHD_p2_TissueArray__Visium_HD__Visium_HD_11mm_Human_TA_Colon_Cancer
VisiumHD_p2_TissueArray__Visium_HD__Visium_HD_11mm_Human_TA_Lung_Cancer
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C01
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C02
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C03
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C04
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C05
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R02_C06
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C01
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C02
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C03
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C04
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C05
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R03_C06
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C01
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C02
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C03
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C04
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C05
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R04_C06
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C01
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C02
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C03
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C04
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C05
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R05_C06
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C01
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C02
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C03
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C04
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C05
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R06_C06
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C01
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C02
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C03
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C04
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C05
VisiumHD_p2_TMA__Visium_HD__Visium_HD_11mm_Human_Breast_Cancer_TMA_Core_R07_C06
VisiumHD_p2_WholeSlide__Visium_HD__Visium_HD_11mm_Human_Colon_Cancer_Fresh_Frozen
VisiumHD_p2_WholeSlide__Visium_HD__Visium_HD_6p5mm_Human_Colon_Cancer
VisiumHD_p2_WholeSlide__Visium_HD__Visium_HD_6p5mm_Human_Heart
Visium_HD_10xGenomics__Visium_HD__Visium_HD_3prime_Human_Ovarian_Cancer
Visium_HD_10xGenomics__Visium_HD__Visium_HD_3prime_Human_Ovarian_Cancer_FF
Visium_HD_10xGenomics__Visium_HD__Visium_HD_3prime_Human_Ovarian_Cancer_FF_Min_Depth
Visium_HD_10xGenomics__Visium_HD__Visium_HD_3prime_Human_Pancreatic_Cancer
Visium_HD_10xGenomics__Visium_HD__Visium_HD_FF_Human_Breast_Cancer
Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Breast_Cancer_Fixed_Frozen
Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Breast_Cancer_Fresh_Frozen
Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Colon_Cancer
Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Colon_Cancer_P1
Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Colon_Cancer_P5
Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Colon_Normal_P3
Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Colon_Normal_P5
Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Kidney_FFPE
Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Lung_Cancer_Fixed_Frozen
Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Lung_Cancer_HD_Only_Experiment1
Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Lung_Cancer_HD_Only_Experiment2
Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Lung_Cancer_post_Xenium_Prime_5K_Experiment2
Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Lung_Cancer_post_Xenium_v1_Experiment1
Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Lymph_Node_FFPE
Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Ovarian_Cancer_FF
Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Ovarian_Cancer_FF_Min_Depth
Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Pancreas
Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Prostate_Cancer_FFPE
Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Tonsil_Fresh_Frozen
Xenium5k_10xGenomics__Xenium__Xenium_Prime_Breast_Cancer_FFPE
Xenium5k_10xGenomics__Xenium__Xenium_Prime_Cervical_Cancer_FFPE
Xenium5k_10xGenomics__Xenium__Xenium_Prime_Human_Lung_Cancer_FFPE
Xenium5k_10xGenomics__Xenium__Xenium_Prime_Human_Lymph_Node_Reactive_FFPE
Xenium5k_10xGenomics__Xenium__Xenium_Prime_Human_Ovary_Cancer_FF
Xenium5k_10xGenomics__Xenium__Xenium_Prime_Human_Ovary_FF
Xenium5k_10xGenomics__Xenium__Xenium_Prime_Human_Prostate_FFPE
Xenium5k_10xGenomics__Xenium__Xenium_Prime_Human_Skin_FFPE
Xenium5k_10xGenomics__Xenium__Xenium_Prime_Ovarian_Cancer_FFPE_XRrun
B-NHL_38379051__PCF_CODEX__191_1reg001
B-NHL_38379051__PCF_CODEX__191_1reg002
B-NHL_38379051__PCF_CODEX__191_1reg003
B-NHL_38379051__PCF_CODEX__191_1reg004
B-NHL_38379051__PCF_CODEX__191_1reg005
B-NHL_38379051__PCF_CODEX__191_1reg006
B-NHL_38379051__PCF_CODEX__191_2reg001
B-NHL_38379051__PCF_CODEX__191_2reg002
B-NHL_38379051__PCF_CODEX__191_2reg003
B-NHL_38379051__PCF_CODEX__191_2reg004
B-NHL_38379051__PCF_CODEX__191_2reg005
B-NHL_38379051__PCF_CODEX__191_2reg006
B-NHL_38379051__PCF_CODEX__191_2reg007
B-NHL_38379051__PCF_CODEX__191_2reg008
B-NHL_38379051__PCF_CODEX__191_3reg001
B-NHL_38379051__PCF_CODEX__191_3reg002
B-NHL_38379051__PCF_CODEX__191_3reg003
B-NHL_38379051__PCF_CODEX__191_3reg004
B-NHL_38379051__PCF_CODEX__191_3reg005
B-NHL_38379051__PCF_CODEX__191_3reg006
B-NHL_38379051__PCF_CODEX__191_3reg007
B-NHL_38379051__PCF_CODEX__191_3reg008
B-NHL_38379051__PCF_CODEX__191_4reg001
B-NHL_38379051__PCF_CODEX__191_4reg002
B-NHL_38379051__PCF_CODEX__191_4reg003
B-NHL_38379051__PCF_CODEX__191_4reg004
B-NHL_38379051__PCF_CODEX__191_4reg005
B-NHL_38379051__PCF_CODEX__191_4reg006
B-NHL_38379051__PCF_CODEX__191_4reg007
B-NHL_38379051__PCF_CODEX__191_5reg001
B-NHL_38379051__PCF_CODEX__191_5reg002
B-NHL_38379051__PCF_CODEX__191_5reg003
B-NHL_38379051__PCF_CODEX__191_5reg004
B-NHL_38379051__PCF_CODEX__191_5reg005
B-NHL_38379051__PCF_CODEX__191_5reg006
BoneMarrow_38714197__PCF_CODEX__H10
BoneMarrow_38714197__PCF_CODEX__H14
BoneMarrow_38714197__PCF_CODEX__H26
BoneMarrow_38714197__PCF_CODEX__H27
BoneMarrow_38714197__PCF_CODEX__H32
BoneMarrow_38714197__PCF_CODEX__H33
BoneMarrow_38714197__PCF_CODEX__H35
BoneMarrow_38714197__PCF_CODEX__H36
BoneMarrow_38714197__PCF_CODEX__H37
BoneMarrow_38714197__PCF_CODEX__H38
BoneMarrow_38714197__PCF_CODEX__H39
BoneMarrow_38714197__PCF_CODEX__H41
BoneMarrow_38714197__PCF_CODEX__SB67_NBM27_H10_CODEX_Mesmer
BoneMarrow_38714197__PCF_CODEX__SB67_NBM28_H14_CODEX_Mesmer
BoneMarrow_38714197__PCF_CODEX__SB67_NBM31_H32_CODEX_Mesmer
BoneMarrow_38714197__PCF_CODEX__SB67_NBM32_H37_CODEX_Mesmer
BoneMarrow_38714197__PCF_CODEX__SB67_NBM33_H36_CODEX_Mesmer
BoneMarrow_38714197__PCF_CODEX__SB67_NBM34_H38_CODEX_Mesmer
BoneMarrow_38714197__PCF_CODEX__SB67_NBM36_H26_CODEX_Mesmer
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BRCA_31959985__IMC__BaselTMA_SP43_102_X2Y4__gate363
BRCA_31959985__IMC__BaselTMA_SP43_103_X5Y4__gate321
BRCA_31959985__IMC__BaselTMA_SP43_103_X6Y4__gate322
BRCA_31959985__IMC__BaselTMA_SP43_107_X4Y7__gate350
BRCA_31959985__IMC__BaselTMA_SP43_108_X13Y8__gate376
Curation
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Curated
DEG
All
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Available
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7,730 matches
7,508 curated
Download sample CSV
Showing 7,501-7,550 of 7,730
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Sample
Organ
Disease state
Technique
Cells
Spatial module
Curation
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hSkin_nondiseased_section_1_FFPE
Xenium Human Multi-Tissue and Cancer Panel showcase
Skin
Healthy/control
Xenium
68,476
D
I
T
Curated
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hSkin_nondiseased_section_2_FFPE
Xenium Human Multi-Tissue and Cancer Panel showcase
Skin
Healthy/control
Xenium
90,106
D
I
T
Curated
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hTonsil_follicular_lymphoid_hyperplasia_section_FFPE
Xenium Human Multi-Tissue and Cancer Panel showcase
Lymphoid tissue
Non-cancer disease
Xenium
864,388
D
I
T
Curated
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hTonsil_reactive_follicular_hyperplasia_section_FFPE
Xenium Human Multi-Tissue and Cancer Panel showcase
Lymphoid tissue
Non-cancer disease
Xenium
1,349,620
D
I
T
Curated
XeniumMulti_10xGenomics__Xenium__Xenium_V1_Human_Kidney_FFPE_Protein_updated
Xenium Human Multi-Tissue and Cancer Panel showcase
Kidney
Primary cancer
Xenium
465,534
D
I
T
Curated
XeniumMulti_10xGenomics__Xenium__Xenium_V1_Human_Ovary_Cancer_FF
Xenium Human Multi-Tissue and Cancer Panel showcase
Ovary
Primary cancer
Xenium
205,082
D
I
T
Curated
XeniumMulti_10xGenomics__Xenium__Xenium_V1_human_Pancreas_FFPE
Xenium Human Multi-Tissue and Cancer Panel showcase
Pancreas
Primary cancer
Xenium
140,702
D
I
T
Curated
XeniumMulti_10xGenomics__Xenium__Xenium_V1_humanLung_Cancer_FFPE
Xenium Human Multi-Tissue and Cancer Panel showcase
Lung
Primary cancer
Xenium
162,254
D
I
T
Curated
GSM5910280_Panel1_CW60220F-1_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910280_Panel1_CW60220F-1_i
Brain
Non-cancer disease
MERFISH
38,263
D
I
T
Source
GSM5910281_Panel1_CW60230E-1_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910281_Panel1_CW60230E-1_i
Brain
Non-cancer disease
MERFISH
33,845
D
I
T
Source
GSM5910282_Panel1_CW20012E-1_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910282_Panel1_CW20012E-1_i
Brain
Non-cancer disease
MERFISH
23,390
D
I
T
Source
GSM5910283_Panel1_CW60040F-1_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910283_Panel1_CW60040F-1_i
Brain
Non-cancer disease
MERFISH
16,178
D
I
T
Source
GSM5910284_Panel1_CW20053A-1_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910284_Panel1_CW20053A-1_i
Brain
Non-cancer disease
MERFISH
34,305
D
I
T
Source
GSM5910285_Panel1_CW20069F-1_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910285_Panel1_CW20069F-1_i
Brain
Non-cancer disease
MERFISH
27,708
D
I
T
Source
GSM5910286_Panel1_CW60218E-1_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910286_Panel1_CW60218E-1_i
Brain
Non-cancer disease
MERFISH
38,964
D
I
T
Source
GSM5910287_Panel1_CW60219E-1_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910287_Panel1_CW60219E-1_i
Brain
Non-cancer disease
MERFISH
14,837
D
I
T
Source
GSM5910288_Panel1_CW60220F-2_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910288_Panel1_CW60220F-2_i
Brain
Non-cancer disease
MERFISH
22,461
D
I
T
Source
GSM5910289_Panel1_CW60230E-2_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910289_Panel1_CW60230E-2_i
Brain
Non-cancer disease
MERFISH
6,717
D
I
T
Source
GSM5910290_Panel1_CW60218E-2_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910290_Panel1_CW60218E-2_i
Brain
Non-cancer disease
MERFISH
31,875
D
I
T
Source
GSM5910291_Panel1_CW60040F-2_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910291_Panel1_CW60040F-2_i
Brain
Non-cancer disease
MERFISH
49,596
D
I
T
Source
GSM5910292_Panel2_CW60220F-3_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910292_Panel2_CW60220F-3_i
Brain
Non-cancer disease
MERFISH
7,270
D
I
T
Source
GSM5910293_Panel2_CW60230E-4_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910293_Panel2_CW60230E-4_i
Brain
Non-cancer disease
MERFISH
12,972
D
I
T
Source
GSM5910294_Panel2_CW20012E-2_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910294_Panel2_CW20012E-2_i
Brain
Non-cancer disease
MERFISH
20,583
D
I
T
Source
GSM5910295_Panel2_CW60219E-2_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910295_Panel2_CW60219E-2_i
Brain
Non-cancer disease
MERFISH
34,616
D
I
T
Source
GSM5910296_Panel2_CW60040F-3_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910296_Panel2_CW60040F-3_i
Brain
Non-cancer disease
MERFISH
21,116
D
I
T
Source
GSM5910297_Panel2_CW20053A-2_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910297_Panel2_CW20053A-2_i
Brain
Non-cancer disease
MERFISH
15,542
D
I
T
Source
GSM5910298_Panel2_CW20047D-3_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910298_Panel2_CW20047D-3_i
Brain
Non-cancer disease
MERFISH
15,543
D
I
T
Source
GSM5910299_Panel2_CW60040F-4_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910299_Panel2_CW60040F-4_i
Brain
Non-cancer disease
MERFISH
21,137
D
I
T
Source
GSM5910300_Panel3_CW60040F-5_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910300_Panel3_CW60040F-5_i
Brain
Non-cancer disease
MERFISH
8,181
D
I
T
Source
GSM5910301_Panel3_CW60219E-3_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910301_Panel3_CW60219E-3_i
Brain
Non-cancer disease
MERFISH
34,963
D
I
T
Source
GSM5910302_Panel3_CW20012E-2_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910302_Panel3_CW20012E-2_i
Brain
Non-cancer disease
MERFISH
13,636
D
I
T
Source
GSM5910303_Panel3_CW20041A-2_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910303_Panel3_CW20041A-2_i
Brain
Non-cancer disease
MERFISH
13,004
D
I
T
Source
GSM5910304_Panel3_CW20047D-4_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910304_Panel3_CW20047D-4_i
Brain
Non-cancer disease
MERFISH
7,955
D
I
T
Source
GSM5910305_Panel3_CW60219E-3_ii
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910305_Panel3_CW60219E-3_ii
Brain
Non-cancer disease
MERFISH
34,178
D
I
T
Source
GSM5910306_Panel3_CW60230E-4_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910306_Panel3_CW60230E-4_i
Brain
Non-cancer disease
MERFISH
34,839
D
I
T
Source
GSM5910307_Panel3_CW20012E-2_ii
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910307_Panel3_CW20012E-2_ii
Brain
Non-cancer disease
MERFISH
21,940
D
I
T
Source
GSM5910308_Panel3_CW20053A-2_ii
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910308_Panel3_CW20053A-2_ii
Brain
Non-cancer disease
MERFISH
16,419
D
I
T
Source
GSM5910309_Panel3_CW20053A-2_ii
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910309_Panel3_CW20053A-2_ii
Brain
Non-cancer disease
MERFISH
14,805
D
I
T
Source
GSM5910310_Panel3_CW60219E-4_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910310_Panel3_CW60219E-4_i
Brain
Non-cancer disease
MERFISH
31,932
D
I
T
Source
GSM5910311_Panel3_CW60220F-4_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910311_Panel3_CW60220F-4_i
Brain
Non-cancer disease
MERFISH
19,819
D
I
T
Source
GSM5910312_Panel3_CW20047D-3_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910312_Panel3_CW20047D-3_i
Brain
Non-cancer disease
MERFISH
18,343
D
I
T
Source
GSM5910313_Panel3_CW60040F-4_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910313_Panel3_CW60040F-4_i
Brain
Non-cancer disease
MERFISH
33,896
D
I
T
Source
GSM5910314_Panel4_CW60040F-5_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910314_Panel4_CW60040F-5_i
Brain
Non-cancer disease
MERFISH
5,132
D
I
T
Source
GSM5910315_Panel4_CW20012E-2_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910315_Panel4_CW20012E-2_i
Brain
Non-cancer disease
MERFISH
4,893
D
I
T
Source
GSM5910316_Panel4_CW60220F-3_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910316_Panel4_CW60220F-3_i
Brain
Non-cancer disease
MERFISH
10,538
D
I
T
Source
GSM5910317_Panel4_CW20012E-2_ii
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910317_Panel4_CW20012E-2_ii
Brain
Non-cancer disease
MERFISH
14,849
D
I
T
Source
GSM5910318_Panel4_CW60230E-4_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910318_Panel4_CW60230E-4_i
Brain
Non-cancer disease
MERFISH
22,415
D
I
T
Source
GSM5910319_Panel4_CW20041A-2_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910319_Panel4_CW20041A-2_i
Brain
Non-cancer disease
MERFISH
9,998
D
I
T
Source
GSM5910320_Panel4_CW20053A-2_i
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910320_Panel4_CW20053A-2_i
Brain
Non-cancer disease
MERFISH
12,325
D
I
T
Source
GSM5910321_Panel4_CW20053A-2_ii
ASD_42288509 · MERFISH / MERSCOPE
ASD_42288509__MERFISH__GSM5910321_Panel4_CW20053A-2_ii
Brain
Non-cancer disease
MERFISH
12,854
D
I
T
Source
Showing 7,501-7,550 of 7,730
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