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View by ?Dataset view shows one row per deployed dataset. Sample view shows one row per sample and is better for organ, disease, and spatial availability checks.
View mode ?Cards are for quick scanning. Tables are denser and better for comparison, sorting, and column customization.
Search?Search is user-initiated: type one keyword or several comma-separated keywords, then click Search keyword. Commas search alternatives, for example breast cancer, HNSCC, Xenium.
Filter scope 7,721 matches · sample view
Customized columns 6
Sample table columns Selections persist in the URL and manifest download.
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All records 7,721 matches Download sample CSV
Sample Organ Disease state ?Broad public sample state used for filtering and comparison. Technique Cells ?Number of individually resolved single-cell observations included for the record. Spatial module ?D, I, and T indicate Domains, Interaction, and Topology outputs. Tier badges show ready ontology levels when detailed availability is available.
Melanoma_41916292__CyCIF__D_GZ4 Melanoma_41916292 · CyCIF / Cyclic IF Skin Primary cancer CyCIF 70,488 T1T2T3T1T2T3T1T2T3
HCC_41723121__CosMx_SMI__Liver_2HB LiverCancer_41723121 HCC cohort · CosMx SMI / NanoString SMI Liver Primary cancer CosMx 70,302 T1T2T3T1T2T3T1T2T3
MERFISH_960_Vizgen__MERFISH__MERFISH960HuBrainS3_R1 MERFISH 960-plex Vizgen showcase Brain Healthy/control MERFISH 69,931 T1T2T3T1T2T3T1T2T3
DKD_42056516__CosMx_SMI__HK3421 DKD_42056516 · CosMx SMI / NanoString SMI Kidney Non-cancer disease CosMx 69,846 T1T2T3T1T2T3T1T2T3
CastlemanDisease_40593805__Xenium__xenium_dat__Core2 CastlemanDisease_40593805 · Xenium Lymphoid tissue Non-cancer disease Xenium 69,255 T1T2T3T1T2T3T1T2T3
BoneMarrow_38714197__PCF_CODEX__SB67_NBM34_H38_CODEX_Mesmer BoneMarrow_38714197 · PCF / CODEX / PhenoCycler Fusion Bone marrow Healthy/control CODEX 69,027 T1T2T3T1T2T3T1T2T3
DKD_42056516__CosMx_SMI__HK3035 DKD_42056516 · CosMx SMI / NanoString SMI Kidney Non-cancer disease CosMx 69,024 T1T2T3T1T2T3T1T2T3
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hSkin_nondiseased_section_1_FFPE Xenium Human Multi-Tissue and Cancer Panel showcase Skin Healthy/control Xenium 68,476 T1T2T3T1T2T3T1T2T3
DKD_42056516__CosMx_SMI__HK3624 DKD_42056516 · CosMx SMI / NanoString SMI Kidney Healthy/control CosMx 68,420 T1T2T3T1T2T3T1T2T3
DKD_42056516__CosMx_SMI__HK3631 DKD_42056516 · CosMx SMI / NanoString SMI Kidney Non-cancer disease CosMx 68,106 T1T2T3T1T2T3T1T2T3
B012_Mid jejunum Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B012_Mid jejunum Small intestine Healthy/control CODEX 67,636 T1T2T3T1T2T3T1T2T3
DKD_42056516__CosMx_SMI__HK3474 DKD_42056516 · CosMx SMI / NanoString SMI Kidney Non-cancer disease CosMx 66,865 T1T2T3T1T2T3T1T2T3
B011_Duodenum Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B011_Duodenum Small intestine Healthy/control CODEX 66,845 T1T2T3T1T2T3T1T2T3
Melanoma_41916292__CyCIF__PT35_2_On-Enc+Bin Melanoma_41916292 · CyCIF / Cyclic IF Skin Primary cancer CyCIF 65,411 T1T2T3T1T2T3T1T2T3
BoneMarrow_38714197__PCF_CODEX__SB67_NBM41_H27_CODEX_Mesmer BoneMarrow_38714197 · PCF / CODEX / PhenoCycler Fusion Bone marrow Healthy/control CODEX 65,071 T1T2T3T1T2T3T1T2T3
DLBCL_41874448__PCF_CODEX__DLBCL_41874448_Rochester_13 DLBCL_41874448 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 64,736 T1T2T3T1T2T3T1T2T3
cHL_41923627__PCF_CODEX__Rochester_16_neg cHL_41923627 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 64,674 T1T2T3T1T2T3T1T2T3
Neuroblastoma_41918107__PCF_CODEX__Neuro_c5__TMA5__core_29 Neuroblastoma_41918107 · PCF / CODEX / PhenoCycler Fusion Adrenal gland Primary cancer CODEX 64,504 T1T2T3T1T2T3T1T2T3
DLBCL_41874448__PCF_CODEX__DLBCL_41874448_Rochester_6 DLBCL_41874448 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 64,236 T1T2T3T1T2T3T1T2T3
CastlemanDisease_40593805__Xenium__xenium_dat__Core3 CastlemanDisease_40593805 · Xenium Lymphoid tissue Non-cancer disease Xenium 63,343 T1T2T3T1T2T3T1T2T3
DLBCL_41874448__PCF_CODEX__DLBCL_41874448_Rochester_23 DLBCL_41874448 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 63,060 T1T2T3T1T2T3T1T2T3
DLBCL_41874448__PCF_CODEX__DLBCL_41874448_Rochester_18 DLBCL_41874448 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 63,003 T1T2T3T1T2T3T1T2T3
Neuroblastoma_41918107__PCF_CODEX__Neuro_c1__TMA1__core_9 Neuroblastoma_41918107 · PCF / CODEX / PhenoCycler Fusion Adrenal gland Primary cancer CODEX 62,895 T1T2T3T1T2T3T1T2T3
ICC_41723121__CosMx_SMI__Liver_2CT LiverCancer_41723121 iCCA cohort · CosMx SMI / NanoString SMI Liver Primary cancer CosMx 62,260 T1T2T3T1T2T3T1T2T3
TNBC_38194915__PCF_CODEX__210208_Breast_Cassette6_reg1_v5 TNBC_38194915 · PCF / CODEX / PhenoCycler Fusion Breast Primary cancer CODEX 62,214 T1T2T3T1T2T3T1T2T3
Melanoma_41916292__CyCIF__PT530_1_Pre-Pembro Melanoma_41916292 · CyCIF / Cyclic IF Skin Primary cancer CyCIF 62,024 T1T2T3T1T2T3T1T2T3
Intestine_39843748__Xenium__GSE280895_human__human_05_r2 Intestine_39843748 · Xenium Small intestine Healthy/control Xenium 61,896 T1T2T3T1T2T3T1T2T3
TNBC_38194915__PCF_CODEX__210217_Breast_Cassette13_reg2_v5 TNBC_38194915 · PCF / CODEX / PhenoCycler Fusion Breast Primary cancer CODEX 61,853 T1T2T3T1T2T3T1T2T3
BoneMarrow_38714197__PCF_CODEX__SB67_NBM46_AML1_382_CODEX_Mesmer BoneMarrow_38714197 · PCF / CODEX / PhenoCycler Fusion Bone marrow Primary cancer CODEX 61,506 T1T2T3T1T2T3T1T2T3
ICC_41723121__CosMx_SMI__Liver_2CB LiverCancer_41723121 iCCA cohort · CosMx SMI / NanoString SMI Liver Primary cancer CosMx 60,720 T1T2T3T1T2T3T1T2T3
DKD_42056516__CosMx_SMI__HK3588 DKD_42056516 · CosMx SMI / NanoString SMI Kidney Healthy/control CosMx 60,390 T1T2T3T1T2T3T1T2T3
DKD_42056516__CosMx_SMI__HK3531 DKD_42056516 · CosMx SMI / NanoString SMI Kidney Non-cancer disease CosMx 60,305 T1T2T3T1T2T3T1T2T3
DKD_42056516__CosMx_SMI__HK3614 DKD_42056516 · CosMx SMI / NanoString SMI Kidney Non-cancer disease CosMx 60,250 T1T2T3T1T2T3T1T2T3
TNBC_38194915__PCF_CODEX__210122_Breast_Cassette7_reg1_v5 TNBC_38194915 · PCF / CODEX / PhenoCycler Fusion Breast Primary cancer CODEX 60,223 T1T2T3T1T2T3T1T2T3
DLBCL_41874448__PCF_CODEX__DLBCL_41874448_Rochester_15 DLBCL_41874448 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 60,111 T1T2T3T1T2T3T1T2T3
DLBCL_41874448__PCF_CODEX__DLBCL_41874448_Rochester_11 DLBCL_41874448 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 60,038 T1T2T3T1T2T3T1T2T3
NormalSkin_41872488__MERFISH__202308311115_D041-43--lastprobes-083123_VMSC02301_region_1 NormalSkin_41872488 · MERFISH / MERSCOPE Skin Healthy/control MERFISH 59,743 T1T2T3T1T2T3T1T2T3
Intestine_39843748__Xenium__GSE280895_human__human_05_r1 Intestine_39843748 · Xenium Small intestine Healthy/control Xenium 59,128 T1T2T3T1T2T3T1T2T3
PulmonaryFibrosis_39901013__Xenium__VUILD115 PulmonaryFibrosis_39901013 · Xenium Lung Non-cancer disease Xenium 58,850 T1T2T3T1T2T3T1T2T3
B009_Right Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B009_Right Large intestine Healthy/control CODEX 58,349 T1T2T3T1T2T3T1T2T3
BoneMarrow_38714197__PCF_CODEX__SB67_NBM44_AML2_191_CODEX_Mesmer BoneMarrow_38714197 · PCF / CODEX / PhenoCycler Fusion Bone marrow Primary cancer CODEX 56,978 T1T2T3T1T2T3T1T2T3
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hKidney_cancer_section Xenium Human Multi-Tissue and Cancer Panel showcase Kidney Primary cancer Xenium 56,510 T1T2T3T1T2T3T1T2T3
TNBC_38194915__PCF_CODEX__210129_Breast_Cassette4_reg2_v5 TNBC_38194915 · PCF / CODEX / PhenoCycler Fusion Breast Primary cancer CODEX 56,452 T1T2T3T1T2T3T1T2T3
NIH-5900-BA17 Neocortex_39779846 · MERFISH / MERSCOPE Neocortex_39779846__MERFISH__NIH-5900-BA17 Brain Healthy/control MERFISH 56,343 T1T2T3T1T2T3T1T2T3
B006_Duodenum Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B006_Duodenum Small intestine Healthy/control CODEX 56,310 T1T2T3T1T2T3T1T2T3
B009_Mid jejunum_extra Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B009_Mid jejunum_extra Small intestine Healthy/control CODEX 56,182 T1T2T3T1T2T3T1T2T3
TNBC_38194915__PCF_CODEX__210215_Breast_Cassette12_reg1_v5 TNBC_38194915 · PCF / CODEX / PhenoCycler Fusion Breast Primary cancer CODEX 56,084 T1T2T3T1T2T3T1T2T3
Melanoma_41916292__CyCIF__F_GZ6 Melanoma_41916292 · CyCIF / Cyclic IF Skin Primary cancer CyCIF 55,850 T1T2T3T1T2T3T1T2T3
DKD_42056516__CosMx_SMI__HK2924 DKD_42056516 · CosMx SMI / NanoString SMI Kidney Healthy/control CosMx 55,733 T1T2T3T1T2T3T1T2T3
DKD_42056516__CosMx_SMI__HK2873 DKD_42056516 · CosMx SMI / NanoString SMI Kidney Non-cancer disease CosMx 55,271 T1T2T3T1T2T3T1T2T3