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View by ?Dataset view shows one row per deployed dataset. Sample view shows one row per sample and is better for organ, disease, and spatial availability checks.
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Search?Search is user-initiated: type one keyword or several comma-separated keywords, then click Search keyword. Commas search alternatives, for example breast cancer, HNSCC, Xenium.
Filter scope 7,721 matches · sample view
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All records 7,721 matches Download sample CSV
Sample Organ Disease state ?Broad public sample state used for filtering and comparison. Technique Cells ?Number of individually resolved single-cell observations included for the record. Spatial module ?D, I, and T indicate Domains, Interaction, and Topology outputs. Tier badges show ready ontology levels when detailed availability is available.
HNSCC_41616773__Other_ST__TMA1_reg070 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 21,295 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg039 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 21,284 T1T2T3T1T2T3T1T2T3
B004_Ascending Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B004_Ascending Large intestine Healthy/control CODEX 21,232 T1T2T3T1T2T3T1T2T3
B011_Sigmoid Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B011_Sigmoid Small intestine Healthy/control CODEX 21,201 T1T2T3T1T2T3T1T2T3
HCC_39304772__PCF_CODEX__c002_v001_r001_reg028 HCC_39304772 · PCF / CODEX / PhenoCycler Fusion Liver Primary cancer CODEX 21,147 T1T2T3T1T2T3T1T2T3
BoneMarrow_38714197__PCF_CODEX__SB67_NBM38_H33_CODEX_Mesmer BoneMarrow_38714197 · PCF / CODEX / PhenoCycler Fusion Bone marrow Healthy/control CODEX 21,145 T1T2T3T1T2T3T1T2T3
HGSC_39179931__Xenium__XEN_T10_F2 HGSC_39179931 · Xenium Peritoneum Metastatic cancer Xenium 21,101 T1T2T3T1T2T3T1T2T3
DLBCL_41874448__PCF_CODEX__DLBCL_41874448_DFCI_7.1 DLBCL_41874448 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 21,013 T1T2T3T1T2T3T1T2T3
HCC_41723121__CosMx_SMI__Liver_1HB LiverCancer_41723121 HCC cohort · CosMx SMI / NanoString SMI Liver Primary cancer CosMx 20,959 T1T2T3T1T2T3T1T2T3
HCC_39304772__PCF_CODEX__c005_v002_r001_reg023 HCC_39304772 · PCF / CODEX / PhenoCycler Fusion Liver Primary cancer CODEX 20,908 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg093 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 20,832 T1T2T3T1T2T3T1T2T3
PulmonaryFibrosis_39901013__Xenium__VUILD104LF PulmonaryFibrosis_39901013 · Xenium Lung Non-cancer disease Xenium 20,781 T1T2T3T1T2T3T1T2T3
HCC_39965889__PCF_CODEX__B6_Post_Reg2_Tumor_Core_Analysis HCC_39965889 · PCF / CODEX / PhenoCycler Fusion Liver Primary cancer CODEX 20,734 T1T2T3T1T2T3T1T2T3
HGSC_39179931__Xenium__XEN_T10_A2 HGSC_39179931 · Xenium Ovary Primary cancer Xenium 20,655 T1T2T3T1T2T3T1T2T3
NormalSkin_41872488__MERFISH__202404041030_D165--1-6--04042024_VMSC02301_region_3 NormalSkin_41872488 · MERFISH / MERSCOPE Skin Healthy/control MERFISH 20,582 T1T2T3T1T2T3T1T2T3
HCC_39304772__PCF_CODEX__c003_v001_r001_reg003 HCC_39304772 · PCF / CODEX / PhenoCycler Fusion Liver Primary cancer CODEX 20,561 T1T2T3T1T2T3T1T2T3
B011_Left Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B011_Left Large intestine Healthy/control CODEX 20,504 T1T2T3T1T2T3T1T2T3
B011_Right Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B011_Right Large intestine Healthy/control CODEX 20,382 T1T2T3T1T2T3T1T2T3
B006_Descending Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B006_Descending Large intestine Healthy/control CODEX 20,379 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__F12 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 20,339 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__E6 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 20,311 T1T2T3T1T2T3T1T2T3
Melanoma_41916292__CyCIF__PT208_4_Post-Ipi_Pre-Pembro-2 Melanoma_41916292 · CyCIF / Cyclic IF Skin Primary cancer CyCIF 20,140 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg086 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 20,130 T1T2T3T1T2T3T1T2T3
HCC_39304772__PCF_CODEX__c005_v002_r001_reg025 HCC_39304772 · PCF / CODEX / PhenoCycler Fusion Liver Primary cancer CODEX 20,033 T1T2T3T1T2T3T1T2T3
HNSCCValidation_41616773__PCF_CODEX__B2 HNSCC_41616773 PCF validation cohort Lymph node metastasis Metastatic cancer CODEX 19,794 T1T2T3T1T2T3T1T2T3
B010_Left Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B010_Left Large intestine Healthy/control CODEX 19,612 T1T2T3T1T2T3T1T2T3
DLBCL_41874448__PCF_CODEX__DLBCL_41874448_DFCI_2.2 DLBCL_41874448 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 19,565 T1T2T3T1T2T3T1T2T3
Melanoma_41916292__CyCIF__PT272_1_Pre-Pembro Melanoma_41916292 · CyCIF / Cyclic IF Skin Primary cancer CyCIF 19,554 T1T2T3T1T2T3T1T2T3
HGSC_39179931__Xenium__XEN_T10_B2 HGSC_39179931 · Xenium Ovary Primary cancer Xenium 19,521 T1T2T3T1T2T3T1T2T3
DLBCL_41874448__PCF_CODEX__DLBCL_41874448_DFCI_15.2 DLBCL_41874448 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 19,518 T1T2T3T1T2T3T1T2T3
HGSC_39179931__Xenium__XEN_T10_G3 HGSC_39179931 · Xenium Peritoneum Metastatic cancer Xenium 19,065 T1T2T3T1T2T3T1T2T3
HNSCCValidation_41616773__PCF_CODEX__G10 HNSCC_41616773 PCF validation cohort Lymph node metastasis Metastatic cancer CODEX 19,042 T1T2T3T1T2T3T1T2T3
Neuroblastoma_41918107__PCF_CODEX__Neuro_c5__TMA5__core_27 Neuroblastoma_41918107 · PCF / CODEX / PhenoCycler Fusion Adrenal gland Primary cancer CODEX 18,993 T1T2T3T1T2T3T1T2T3
HCC_39304772__PCF_CODEX__c004_v002_r001_reg002 HCC_39304772 · PCF / CODEX / PhenoCycler Fusion Liver Primary cancer CODEX 18,875 T1T2T3T1T2T3T1T2T3
Neuroblastoma_41918107__PCF_CODEX__Neuro_c1__TMA1__core_10 Neuroblastoma_41918107 · PCF / CODEX / PhenoCycler Fusion Adrenal gland Primary cancer CODEX 18,838 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__C13 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 18,777 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg065 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 18,639 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg012 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 18,567 T1T2T3T1T2T3T1T2T3
Neuroblastoma_41918107__PCF_CODEX__Neuro_c3__TMA3__core_25 Neuroblastoma_41918107 · PCF / CODEX / PhenoCycler Fusion Adrenal gland Primary cancer CODEX 18,502 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg056 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 18,427 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg049 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 18,321 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg080 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 18,306 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg115 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 18,277 T1T2T3T1T2T3T1T2T3
HGSC_39179931__Xenium__XEN_T10_I2 HGSC_39179931 · Xenium Peritoneum Metastatic cancer Xenium 18,004 T1T2T3T1T2T3T1T2T3
DKD_42056516__Xenium__1005 DKD_42056516 · Xenium Kidney Non-cancer disease Xenium 17,937 T1T2T3T1T2T3T1T2T3
HGSC_39179931__Xenium__XEN_T10_C2 HGSC_39179931 · Xenium Ovary Primary cancer Xenium 17,895 T1T2T3T1T2T3T1T2T3
HCC_39965889__PCF_CODEX__A2_Pre_Tumor_Core_Analysis HCC_39965889 · PCF / CODEX / PhenoCycler Fusion Liver Primary cancer CODEX 17,854 T1T2T3T1T2T3T1T2T3
Melanoma_41916292__CyCIF__PT42_2_On-Enc+Bin_Pre-Ipi Melanoma_41916292 · CyCIF / Cyclic IF Skin Primary cancer CyCIF 17,815 T1T2T3T1T2T3T1T2T3
B005_Ileum Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B005_Ileum Small intestine Healthy/control CODEX 17,670 T1T2T3T1T2T3T1T2T3
HCC_39327501__PCF_CODEX__TMA8_5_reg013 HCC_39327501 · PCF / CODEX / PhenoCycler Fusion Liver Primary cancer CODEX 17,653 T1T2T3T1T2T3T1T2T3