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View by ?Dataset view shows one row per deployed dataset. Sample view shows one row per sample and is better for organ, disease, and spatial availability checks.
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Search?Search is user-initiated: type one keyword or several comma-separated keywords, then click Search keyword. Commas search alternatives, for example breast cancer, HNSCC, Xenium.
Filter scope 7,721 matches · sample view
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All records 7,721 matches Download sample CSV
Sample Organ Disease state ?Broad public sample state used for filtering and comparison. Technique Cells ?Number of individually resolved single-cell observations included for the record. Spatial module ?D, I, and T indicate Domains, Interaction, and Topology outputs. Tier badges show ready ontology levels when detailed availability is available.
HNSCCHealthyLN_41616773__PCF_CODEX__E12 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 25,299 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__C12 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 25,253 T1T2T3T1T2T3T1T2T3
HCC_39965889__PCF_CODEX__B2_Post_Tumor_Core_Analysis HCC_39965889 · PCF / CODEX / PhenoCycler Fusion Liver Primary cancer CODEX 25,159 T1T2T3T1T2T3T1T2T3
B004_Descending - Sigmoid Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B004_Descending - Sigmoid Large intestine Healthy/control CODEX 25,063 T1T2T3T1T2T3T1T2T3
DLBCL_41874448__PCF_CODEX__DLBCL_41874448_Rochester_9 DLBCL_41874448 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 24,993 T1T2T3T1T2T3T1T2T3
TNBC_38194915__PCF_CODEX__210210_Breast_Cassette10_reg2_v5 TNBC_38194915 · PCF / CODEX / PhenoCycler Fusion Breast Primary cancer CODEX 24,928 T1T2T3T1T2T3T1T2T3
PulmonaryFibrosis_39901013__Xenium__VUILD102LF PulmonaryFibrosis_39901013 · Xenium Lung Non-cancer disease Xenium 24,925 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__B6 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 24,826 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__F5 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 24,800 T1T2T3T1T2T3T1T2T3
NormalSkin_41872488__MERFISH__202312131041_D077--1-4--12132023_VMSC02301_region_3 NormalSkin_41872488 · MERFISH / MERSCOPE Skin Healthy/control MERFISH 24,738 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__F13 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 24,638 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__B5 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 24,616 T1T2T3T1T2T3T1T2T3
B006_Descending - Sigmoid Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B006_Descending - Sigmoid Large intestine Healthy/control CODEX 24,585 T1T2T3T1T2T3T1T2T3
HGSC_39179931__Xenium__XEN_T10_D1 HGSC_39179931 · Xenium Peritoneum Metastatic cancer Xenium 24,497 T1T2T3T1T2T3T1T2T3
DKD_42056516__Xenium__1004 DKD_42056516 · Xenium Kidney Non-cancer disease Xenium 24,449 T1T2T3T1T2T3T1T2T3
HCC_39304772__PCF_CODEX__c004_v002_r001_reg033 HCC_39304772 · PCF / CODEX / PhenoCycler Fusion Liver Primary cancer CODEX 24,435 T1T2T3T1T2T3T1T2T3
XeniumBrain_10xGenomics__Xenium__Xenium_V1_FFPE_Human_Brain_Healthy_With_Addon Xenium Human Brain Gene Expression Panel showcase Brain Non-cancer disease Xenium 24,406 T1T2T3T1T2T3T1T2T3
NormalSkin_41872488__MERFISH__202402221100_D151-1-6--fullrun--rerun--02222024_VMSC02301_region_3 NormalSkin_41872488 · MERFISH / MERSCOPE Skin Healthy/control MERFISH 24,405 T1T2T3T1T2T3T1T2T3
NormalSkin_41872488__MERFISH__202404041030_D165--1-6--04042024_VMSC02301_region_4 NormalSkin_41872488 · MERFISH / MERSCOPE Skin Healthy/control MERFISH 24,183 T1T2T3T1T2T3T1T2T3
B010_Sigmoid Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B010_Sigmoid Small intestine Healthy/control CODEX 24,158 T1T2T3T1T2T3T1T2T3
HCC_39965889__PCF_CODEX__A2_post_Analysis HCC_39965889 · PCF / CODEX / PhenoCycler Fusion Liver Primary cancer CODEX 24,056 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg061 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 24,008 T1T2T3T1T2T3T1T2T3
PulmonaryFibrosis_39901013__Xenium__VUILD104MF PulmonaryFibrosis_39901013 · Xenium Lung Non-cancer disease Xenium 23,998 T1T2T3T1T2T3T1T2T3
NormalSkin_41872488__MERFISH__202402221100_D151-1-6--fullrun--rerun--02222024_VMSC02301_region_4 NormalSkin_41872488 · MERFISH / MERSCOPE Skin Healthy/control MERFISH 23,992 T1T2T3T1T2T3T1T2T3
HGSC_39179931__Xenium__XEN_T10_D5 HGSC_39179931 · Xenium Peritoneum Metastatic cancer Xenium 23,893 T1T2T3T1T2T3T1T2T3
DLBCL_41874448__PCF_CODEX__DLBCL_41874448_DFCI_22.2 DLBCL_41874448 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 23,848 T1T2T3T1T2T3T1T2T3
HGSC_39179931__MERFISH__MER_TB23923 HGSC_39179931 · MERFISH / MERSCOPE Ovary Primary cancer MERFISH 23,836 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__A13 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 23,749 T1T2T3T1T2T3T1T2T3
PulmonaryFibrosis_39901013__Xenium__THD0011 PulmonaryFibrosis_39901013 · Xenium Lung Healthy/control Xenium 23,676 T1T2T3T1T2T3T1T2T3
CosMxWTx_Bruker__CosMx_SMI__CosMxPancreasSmallWTxUp_Bruker Bruker CosMx WTx FFPE showcase Pancreas Healthy/control CosMx 23,640 T1T2T3T1T2T3T1T2T3
HNSCCValidation_41616773__PCF_CODEX__F9 HNSCC_41616773 PCF validation cohort Lymph node metastasis Metastatic cancer CODEX 23,608 T1T2T3T1T2T3T1T2T3
HGSC_39179931__Xenium__XEN_T10_I1 HGSC_39179931 · Xenium Peritoneum Metastatic cancer Xenium 23,472 T1T2T3T1T2T3T1T2T3
HNSCCValidation_41616773__PCF_CODEX__G2 HNSCC_41616773 PCF validation cohort Lymphoid tissue Primary cancer CODEX 23,018 T1T2T3T1T2T3T1T2T3
B010_Right Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B010_Right Large intestine Healthy/control CODEX 22,961 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg027 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 22,700 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg026 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 22,598 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg076 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 22,582 T1T2T3T1T2T3T1T2T3
DKD_42056516__CosMx_SMI__HK3535 DKD_42056516 · CosMx SMI / NanoString SMI Kidney Non-cancer disease CosMx 22,480 T1T2T3T1T2T3T1T2T3
DLBCL_41874448__PCF_CODEX__DLBCL_41874448_DFCI_12.1 DLBCL_41874448 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 22,381 T1T2T3T1T2T3T1T2T3
HGSC_39179931__Xenium__XEN_T10_C4 HGSC_39179931 · Xenium Peritoneum Metastatic cancer Xenium 22,249 T1T2T3T1T2T3T1T2T3
HCC_39965889__PCF_CODEX__A2_Post2_Tumor_Core HCC_39965889 · PCF / CODEX / PhenoCycler Fusion Liver Primary cancer CODEX 22,221 T1T2T3T1T2T3T1T2T3
NormalSkin_41872488__MERFISH__202404151153_Panniculectomy--D048-D142---04152024_VMSC02301_region_1 NormalSkin_41872488 · MERFISH / MERSCOPE Skin Healthy/control MERFISH 22,169 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__F3 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 22,145 T1T2T3T1T2T3T1T2T3
HNSCCValidation_41616773__PCF_CODEX__E10 HNSCC_41616773 PCF validation cohort Lymphoid tissue Primary cancer CODEX 22,094 T1T2T3T1T2T3T1T2T3
cHL_41923627__PCF_CODEX__Rochester_10_pos cHL_41923627 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 22,066 T1T2T3T1T2T3T1T2T3
CML_41592325__PCF_CODEX__SchuerchCMLBM_c001_v001_r002_reg008 CML_41592325 · PCF / CODEX / PhenoCycler Fusion Bone marrow Primary cancer CODEX 21,887 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg075 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 21,860 T1T2T3T1T2T3T1T2T3
cHL_41923627__PCF_CODEX__Tubingen_31_pos cHL_41923627 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 21,856 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg059 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 21,755 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg040 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 21,723 T1T2T3T1T2T3T1T2T3