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View by ?Dataset view shows one row per deployed dataset. Sample view shows one row per sample and is better for organ, disease, and spatial availability checks.
View mode ?Cards are for quick scanning. Tables are denser and better for comparison, sorting, and column customization.
Search?Search is user-initiated: type one keyword or several comma-separated keywords, then click Search keyword. Commas search alternatives, for example breast cancer, HNSCC, Xenium.
Filter scope 7,721 matches · sample view
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All records 7,721 matches Download sample CSV
Sample Organ Disease state ?Broad public sample state used for filtering and comparison. Technique Cells ?Number of individually resolved single-cell observations included for the record. Spatial module ?D, I, and T indicate Domains, Interaction, and Topology outputs. Tier badges show ready ontology levels when detailed availability is available.
HNSCCHealthyLN_41616773__PCF_CODEX__C7 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 35,406 T1T2T3T1T2T3T1T2T3
B006_Mid-jejunum Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B006_Mid-jejunum Small intestine Healthy/control CODEX 35,371 T1T2T3T1T2T3T1T2T3
CML_41592325__PCF_CODEX__SchuerchCMLBM_c006_v001_r002_reg009 CML_41592325 · PCF / CODEX / PhenoCycler Fusion Bone marrow Primary cancer CODEX 35,327 T1T2T3T1T2T3T1T2T3
cHL_41923627__PCF_CODEX__Tubingen_12_pos cHL_41923627 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 35,253 T1T2T3T1T2T3T1T2T3
B008_Proximal jejunum_extra Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B008_Proximal jejunum_extra Small intestine Healthy/control CODEX 34,850 T1T2T3T1T2T3T1T2T3
B009_Trans Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B009_Trans Large intestine Healthy/control CODEX 34,642 T1T2T3T1T2T3T1T2T3
SpinalCord_38513664__ISS__EAE_PEAK_B_R1 SpinalCord_38513664 · ISS / In Situ Sequencing Spinal cord Non-cancer disease ISS 34,541 T1T2T3T1T2T3T1T2T3
TNBC_38194915__PCF_CODEX__210127_Breast_Cassette9_reg1_v5 TNBC_38194915 · PCF / CODEX / PhenoCycler Fusion Breast Primary cancer CODEX 34,159 T1T2T3T1T2T3T1T2T3
CutaneousLeishmaniasis_40371647__CosMx_SMI__P5 CutaneousLeishmaniasis_40371647 · CosMx SMI / NanoString SMI Skin Non-cancer disease CosMx 34,139 T1T2T3T1T2T3T1T2T3
B010_Duodenum Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B010_Duodenum Small intestine Healthy/control CODEX 34,133 T1T2T3T1T2T3T1T2T3
NormalSkin_41872488__MERFISH__202306070957_AH21-NSFFPE-060723-AH_VMSC02301_region_0 NormalSkin_41872488 · MERFISH / MERSCOPE Skin Healthy/control MERFISH 34,056 T1T2T3T1T2T3T1T2T3
TNBC_38194915__PCF_CODEX__210209_Breast_Cassette3_reg1_v5 TNBC_38194915 · PCF / CODEX / PhenoCycler Fusion Breast Primary cancer CODEX 34,025 T1T2T3T1T2T3T1T2T3
CML_41592325__PCF_CODEX__SchuerchCMLBM_c005_v001_r001_reg001 CML_41592325 · PCF / CODEX / PhenoCycler Fusion Bone marrow Primary cancer CODEX 34,010 T1T2T3T1T2T3T1T2T3
B012_Ileum Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B012_Ileum Small intestine Healthy/control CODEX 33,958 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__D12 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 33,905 T1T2T3T1T2T3T1T2T3
CML_41592325__PCF_CODEX__SchuerchCMLBM_c002_v001_r001_reg008 CML_41592325 · PCF / CODEX / PhenoCycler Fusion Bone marrow Primary cancer CODEX 33,803 T1T2T3T1T2T3T1T2T3
XeniumMulti_10xGenomics__Xenium__Xenium_V1_hBone_nondiseased_section Xenium Human Multi-Tissue and Cancer Panel showcase Musculoskeletal Healthy/control Xenium 33,801 T1T2T3T1T2T3T1T2T3
B004_Transverse Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B004_Transverse Large intestine Healthy/control CODEX 33,793 T1T2T3T1T2T3T1T2T3
HCC_39965889__PCF_CODEX__B3_Post2_Analysis HCC_39965889 · PCF / CODEX / PhenoCycler Fusion Liver Primary cancer CODEX 33,773 T1T2T3T1T2T3T1T2T3
SpinalCord_38513664__ISS__CNTRL_PEAK_B_R3 SpinalCord_38513664 · ISS / In Situ Sequencing Spinal cord Non-cancer disease ISS 33,728 T1T2T3T1T2T3T1T2T3
NormalSkin_41872488__MERFISH__202404041030_D165--1-6--04042024_VMSC02301_region_2 NormalSkin_41872488 · MERFISH / MERSCOPE Skin Healthy/control MERFISH 33,650 T1T2T3T1T2T3T1T2T3
HNSCCValidation_41616773__PCF_CODEX__C3 HNSCC_41616773 PCF validation cohort Lymphoid tissue Healthy/control CODEX 33,510 T1T2T3T1T2T3T1T2T3
BoneMarrow_38714197__PCF_CODEX__SB67_NBM37_H35_CODEX_Mesmer BoneMarrow_38714197 · PCF / CODEX / PhenoCycler Fusion Bone marrow Healthy/control CODEX 33,497 T1T2T3T1T2T3T1T2T3
CML_41592325__PCF_CODEX__SchuerchCMLBM_c005_v001_r001_reg008 CML_41592325 · PCF / CODEX / PhenoCycler Fusion Bone marrow Primary cancer CODEX 33,305 T1T2T3T1T2T3T1T2T3
B005_Transverse Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B005_Transverse Large intestine Healthy/control CODEX 33,281 T1T2T3T1T2T3T1T2T3
CML_41592325__PCF_CODEX__SchuerchCMLBM_c005_v001_r001_reg009 CML_41592325 · PCF / CODEX / PhenoCycler Fusion Bone marrow Primary cancer CODEX 33,252 T1T2T3T1T2T3T1T2T3
cHL_41923627__PCF_CODEX__Tubingen_22_neg cHL_41923627 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 33,209 T1T2T3T1T2T3T1T2T3
Melanoma_41916292__CyCIF__PT42_4_On-Pembro Melanoma_41916292 · CyCIF / Cyclic IF Skin Primary cancer CyCIF 33,064 T1T2T3T1T2T3T1T2T3
cHL_41923627__PCF_CODEX__Tubingen_32_neg cHL_41923627 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 33,022 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__A6 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 33,009 T1T2T3T1T2T3T1T2T3
B011_Ileum Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B011_Ileum Small intestine Healthy/control CODEX 32,944 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__E4 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 32,802 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__A10 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 32,551 T1T2T3T1T2T3T1T2T3
B012_Proximal jejunum Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B012_Proximal jejunum Small intestine Healthy/control CODEX 32,520 T1T2T3T1T2T3T1T2T3
CML_41592325__PCF_CODEX__SchuerchCMLBM_c003_v001_r001_reg002 CML_41592325 · PCF / CODEX / PhenoCycler Fusion Bone marrow Primary cancer CODEX 32,395 T1T2T3T1T2T3T1T2T3
BoneMarrow_38714197__PCF_CODEX__SB67_NBM52_AML3_1329_CODEX_Mesmer BoneMarrow_38714197 · PCF / CODEX / PhenoCycler Fusion Bone marrow Primary cancer CODEX 32,190 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__G3 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 32,057 T1T2T3T1T2T3T1T2T3
CML_41592325__PCF_CODEX__SchuerchCMLBM_c002_v001_r001_reg009 CML_41592325 · PCF / CODEX / PhenoCycler Fusion Bone marrow Primary cancer CODEX 31,908 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__E13 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 31,833 T1T2T3T1T2T3T1T2T3
B011_Trans Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B011_Trans Large intestine Healthy/control CODEX 31,751 T1T2T3T1T2T3T1T2T3
PulmonaryFibrosis_39901013__Xenium__VUILD96LF PulmonaryFibrosis_39901013 · Xenium Lung Non-cancer disease Xenium 31,727 T1T2T3T1T2T3T1T2T3
B010_Mid jejunum Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B010_Mid jejunum Small intestine Healthy/control CODEX 31,583 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__G13 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 31,554 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__G4 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 31,355 T1T2T3T1T2T3T1T2T3
B006_Transverse Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B006_Transverse Large intestine Healthy/control CODEX 31,283 T1T2T3T1T2T3T1T2T3
HNSCCValidation_41616773__PCF_CODEX__A3 HNSCC_41616773 PCF validation cohort Lymphoid tissue Healthy/control CODEX 31,259 T1T2T3T1T2T3T1T2T3
B012_Duodenum Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B012_Duodenum Small intestine Healthy/control CODEX 31,219 T1T2T3T1T2T3T1T2T3
DKD_42056516__Xenium__1003 DKD_42056516 · Xenium Kidney Non-cancer disease Xenium 30,772 T1T2T3T1T2T3T1T2T3
B011_Proximal jejunum Intestine_37468586 · PCF / CODEX / PhenoCycler Fusion Intestine_37468586__PCF_CODEX__B011_Proximal jejunum Small intestine Healthy/control CODEX 30,724 T1T2T3T1T2T3T1T2T3
PulmonaryFibrosis_39901013__Xenium__VUILD107MF PulmonaryFibrosis_39901013 · Xenium Lung Non-cancer disease Xenium 30,615 T1T2T3T1T2T3T1T2T3