scAtria single-cell spatial atlas resource

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View by ?Dataset view shows one row per deployed dataset. Sample view shows one row per sample and is better for organ, disease, and spatial availability checks.
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All records 7,721 matches 7,508 curated Download sample CSV
Atera Spatial transcriptomics Curated

Atera_10xGenomics__Atera__WTA_Preview_FFPE_Breast_Cancer

Dataset: 10x Genomics Atera showcase

Organ: Breast

Disease detail: Breast cancer (ductal carcinoma in situ, HER2-1+)

Disease state: Primary cancer

Cells
170,057
Curation
Curated
Spatial
Open dataset Spatial outputs not yet published for this sample.
Atera Spatial transcriptomics Curated

Atera_10xGenomics__Atera__WTA_Preview_FFPE_Cervical_Cancer

Dataset: 10x Genomics Atera showcase

Organ: Uterus/Cervix

Disease detail: Cervical cancer (squamous cell carcinoma)

Disease state: Primary cancer

Cells
717,576
Curation
Curated
Spatial
Open dataset Spatial outputs not yet published for this sample.
Visium HD Spatial transcriptomics Curated

VisiumHD_p2_TissueArray__Visium_HD__Visium_HD_11mm_Human_TA_Breast_Cancer

Dataset: 10x Genomics Visium HD p2 TissueArray showcase

Organ: Breast

Disease detail: Breast cancer (invasive ductal carcinoma)

Disease state: Primary cancer

Cells
158,058
Curation
Curated
Spatial
Open dataset Spatial outputs not yet published for this sample.
Visium HD Spatial transcriptomics Curated

VisiumHD_p2_TissueArray__Visium_HD__Visium_HD_11mm_Human_TA_Colon_Cancer

Dataset: 10x Genomics Visium HD p2 TissueArray showcase

Organ: Large intestine

Disease detail: Colorectal cancer (adenocarcinoma)

Disease state: Primary cancer

Cells
234,929
Curation
Curated
Spatial
Open dataset Spatial outputs not yet published for this sample.
Visium HD Spatial transcriptomics Curated

VisiumHD_p2_TissueArray__Visium_HD__Visium_HD_11mm_Human_TA_Lung_Cancer

Dataset: 10x Genomics Visium HD p2 TissueArray showcase

Organ: Lung

Disease detail: Non-small cell lung cancer

Disease state: Primary cancer

Cells
113,248
Curation
Curated
Spatial
Open dataset Spatial outputs not yet published for this sample.