scAtria single-cell spatial atlas resource

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7,730 Samples
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Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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Sample Organ Disease state Technique Cells Spatial module Curation
Oral_41663813__Xenium__Oral_41663813_P2a Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 22,328 Source
Oral_41663813__Xenium__Oral_41663813_P2b Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 24,866 Source
Oral_41663813__Xenium__Oral_41663813_P2c Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 4,112 Source
Oral_41663813__Xenium__Oral_41663813_P2d Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 1,787 Source
Oral_41663813__Xenium__Oral_41663813_P3 Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 17,771 Source
Oral_41663813__Xenium__Oral_41663813_P4a Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 7,668 Source
Oral_41663813__Xenium__Oral_41663813_P4b Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 23,554 Source
Oral_41663813__Xenium__Oral_41663813_P5a Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 6,610 Source
Oral_41663813__Xenium__Oral_41663813_P5b Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 10,503 Source
Oral_41663813__Xenium__Oral_41663813_P5c Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 20,385 Source
Oral_41663813__Xenium__Oral_41663813_P6 Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 54,771 Source
Oral_41663813__Xenium__Oral_41663813_P7a Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 9,388 Source
Oral_41663813__Xenium__Oral_41663813_P7b Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 12,222 Source
Oral_41663813__Xenium__Oral_41663813_P8 Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 35,013 Source
Oral_41663813__Xenium__Oral_41663813_P9a Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 5,014 Source
Oral_41663813__Xenium__Oral_41663813_P9b Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 19,836 Source
Oral_41663813__Xenium__Oral_41663813_P9c Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 16,249 Source
Oral_41663813__Xenium__Oral_41663813_P9d Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 1,954 Source
Oral_41663813__Xenium__Oral_41663813_P9e Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 24,232 Source
PDAC_41916312__Xenium__AF-2693_SNV_PDAC_PANCREAS__Region_3 PDAC_41916312 · Xenium Pancreas Primary cancer Xenium 77,695 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F001 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 2,766 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F002 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 1,617 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F003 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 1,762 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F004 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 3,143 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F005 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 2,691 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F006 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 1,625 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F007 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 1,701 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F008 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 1,033 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F009 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 2,573 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F010 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 1,685 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F011 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 611 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F012 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 403 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F013 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 2,148 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F014 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 1,027 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F017 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 426 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F018 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 539 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F021 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 934 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F022 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 317 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F023 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 426 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5666_G2697_G1532_F001 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 591 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5666_G2697_G1532_F002 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 629 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5666_G2697_G1532_F003 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 1,333 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5666_G2697_G1532_F004 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 873 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5666_G2697_G1532_F006 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 334 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5666_G2697_G1532_F007 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 817 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5666_G2697_G1532_F008 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 595 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5666_G2697_G1532_F009 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 401 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5666_G2697_G1532_F010 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 558 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5666_G2697_G1532_F011 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 1,211 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5666_G2697_G1532_F012 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 827 Source