scAtria single-cell spatial atlas resource

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View by ?Dataset view shows one row per deployed dataset. Sample view shows one row per sample and is better for organ, disease, and spatial availability checks.
Dataset Sample
View mode ?Cards are for quick scanning. Tables are denser and better for comparison, sorting, and column customization.
Card Table
Search?Search is user-initiated: type one keyword or several comma-separated keywords, then click Search keyword. Commas search alternatives, for example breast cancer, HNSCC, Xenium.
Filter scope 7 matches · sample view
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Customized columns 6
Sample table columns Selections persist in the URL and manifest download.
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Organ: Uterus/Cervix × 7 matches Download sample CSV
Sample Organ Disease state ?Broad public sample state used for filtering and comparison. Technique Cells ?Number of individually resolved single-cell observations included for the record. Spatial module ?D, I, and T indicate Domains, Interaction, and Topology outputs. Tier badges show ready ontology levels when detailed availability is available.
MERFISH_500_Vizgen__MERFISH__MERFISHUterineCancerP1 MERFISH 500-plex Vizgen showcase Uterus/Cervix Primary cancer MERFISH 843,285
P4 CervicalCancer_CmTSA_41807362 CervicalCancer_CmTSA_41807362__CmTSA__CervicalCancer_CmTSA_41807362_P4 Uterus/Cervix Primary cancer CmTSA 840,956
Xenium5k_10xGenomics__Xenium__Xenium_Prime_Cervical_Cancer_FFPE 10x Genomics Xenium Prime 5K showcase Uterus/Cervix Primary cancer Xenium 840,387
MERFISH_500_Vizgen__MERFISH__MERFISHUterineCancerP2_ROCostain MERFISH 500-plex Vizgen showcase Uterus/Cervix Primary cancer MERFISH 758,506
MERFISH_500_Vizgen__MERFISH__MERFISHUterineCancerP2_RACostain MERFISH 500-plex Vizgen showcase Uterus/Cervix Primary cancer MERFISH 741,749
P3 CervicalCancer_CmTSA_41807362 CervicalCancer_CmTSA_41807362__CmTSA__CervicalCancer_CmTSA_41807362_P3 Uterus/Cervix Primary cancer CmTSA 723,581
Atera_10xGenomics__Atera__WTA_Preview_FFPE_Cervical_Cancer 10x Genomics Atera showcase Uterus/Cervix Primary cancer Atera 717,576