scAtria single-cell spatial atlas resource

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View by ?Dataset view shows one row per deployed dataset. Sample view shows one row per sample and is better for organ, disease, and spatial availability checks.
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Modality: Spatial transcriptomics × 1,768 matches 1,564 curated Download sample CSV
Sample Organ Disease state ?Broad public sample state used for filtering and comparison. Technique Cells ?Number of individually resolved single-cell observations included for the record. Spatial module ?D, I, and T indicate Domains, Interaction, and Topology outputs. Tier badges show ready ontology levels when detailed availability is available. Curation ?Curated records have standardized ontology labels and normalized metadata. Source records are ingested but not fully standardized yet.
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c04_FOV18 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 3,220 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_C04_FOV19 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 3,655 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c06_FOV30 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 3,448 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c07_FOV5 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 3,419 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c07_FOV6 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 3,749 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c11_FOV7 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 4,456 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c11_FOV8 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 4,496 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c15_FOV27 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 3,530 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c15_FOV28 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 3,507 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c15_FOV29 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 3,686 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c16_FOV21 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 3,878 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c16_FOV22 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 3,380 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c17_FOV16 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 3,697 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c17_FOV17 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 3,936 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c18_FOV10 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 2,948 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c18_FOV11 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 3,164 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c18_FOV9 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 3,005 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c20_FOV26 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 3,679 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c21_FOV23 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 3,674 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c22_FOV15 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 2,198 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c23_FOV12 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 2,055 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c23_FOV13 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 2,526 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c25_FOV24 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 3,570 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c25_FOV25 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 3,740 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c28_FOV14 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 2,615 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c29_FOV1 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 4,310 T1T2T3T1T2T3T1T2T3 Curated
DLBCL_41874448__CosMx_SMI__DLBCL_41874448_Rochester_c29_FOV2 DLBCL_41874448 · CosMx SMI / NanoString SMI Lymphoid tissue Primary cancer CosMx 3,803 T1T2T3T1T2T3T1T2T3 Curated
HGSC_39179931__CosMx_SMI__HGSC1 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 542,559 Curated
HGSC_39179931__CosMx_SMI__HGSC113 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 98,482 Curated
HGSC_39179931__CosMx_SMI__HGSC2 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 211,472 Curated
HGSC_39179931__CosMx_SMI__HGSC8 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 294,699 Curated
HGSC_39179931__CosMx_SMI__SMI6K_1_F00003 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 961 T1T2T3T1T2T3T1T2T3 Curated
HGSC_39179931__CosMx_SMI__SMI6K_1_F00006 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 652 T1T2T3T1T2T3T1T2T3 Curated
HGSC_39179931__CosMx_SMI__SMI6K_1_F00007 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 642 T1T2T3T1T2T3T1T2T3 Curated
HGSC_39179931__CosMx_SMI__SMI6K_1_F00011 HGSC_39179931 · CosMx SMI / NanoString SMI Peritoneum Metastatic cancer CosMx 2,107 T1T2T3T1T2T3T1T2T3 Curated
HGSC_39179931__CosMx_SMI__SMI6K_1_F00012 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 528 T1T2T3T1T2T3T1T2T3 Curated
HGSC_39179931__CosMx_SMI__SMI6K_1_F00016 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 2,392 T1T2T3T1T2T3T1T2T3 Curated
HGSC_39179931__CosMx_SMI__SMI6K_1_F00027 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 798 T1T2T3T1T2T3T1T2T3 Curated
HGSC_39179931__CosMx_SMI__SMI6K_1_F00028 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 759 T1T2T3T1T2T3T1T2T3 Curated
HGSC_39179931__CosMx_SMI__SMI6K_1_F00030 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 427 T1T2T3T1T2T3T1T2T3 Curated
HGSC_39179931__CosMx_SMI__SMI6K_1_F00032 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 573 T1T2T3T1T2T3T1T2T3 Curated
HGSC_39179931__CosMx_SMI__SMI6K_1_F00033 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 1,854 T1T2T3T1T2T3T1T2T3 Curated
HGSC_39179931__CosMx_SMI__SMI6K_1_F00035 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 844 T1T2T3T1T2T3T1T2T3 Curated
HGSC_39179931__CosMx_SMI__SMI6K_1_F00039 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 588 T1T2T3T1T2T3T1T2T3 Curated
HGSC_39179931__CosMx_SMI__SMI6K_1_F00041 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 1,413 T1T2T3T1T2T3T1T2T3 Curated
HGSC_39179931__CosMx_SMI__SMI6K_1_F00044 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 642 T1T2T3T1T2T3T1T2T3 Curated
HGSC_39179931__CosMx_SMI__SMI6K_1_F00046 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 1,123 T1T2T3T1T2T3T1T2T3 Curated
HGSC_39179931__CosMx_SMI__SMI6K_1_F00049 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 235 T1T2T3T1T2T3T1T2T3 Curated
HGSC_39179931__CosMx_SMI__SMI6K_2_F00001 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 1,840 T1T2T3T1T2T3T1T2T3 Curated
HGSC_39179931__CosMx_SMI__SMI6K_2_F00002 HGSC_39179931 · CosMx SMI / NanoString SMI Ovary Primary cancer CosMx 1,454 T1T2T3T1T2T3T1T2T3 Curated