scAtria single-cell spatial atlas resource

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View by ?Dataset view shows one row per deployed dataset. Sample view shows one row per sample and is better for organ, disease, and spatial availability checks.
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Search?Search is user-initiated: type one keyword or several comma-separated keywords, then click Search keyword. Commas search alternatives, for example breast cancer, HNSCC, Xenium.
Filter scope 868 matches · sample view
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Organ: Lung × 868 matches Download sample CSV
Sample Organ Disease state ?Broad public sample state used for filtering and comparison. Technique Cells ?Number of individually resolved single-cell observations included for the record. Spatial module ?D, I, and T indicate Domains, Interaction, and Topology outputs. Tier badges show ready ontology levels when detailed availability is available.
LUAD_36725934__IMC__LUAD_D281 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,741 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D234 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,731 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D021 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,725 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D349 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,721 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D341 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,720 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D265 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,719 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D380 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,718 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D268 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,707 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D159 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,688 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D224 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,685 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D097 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,676 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D026 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,675 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D187 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,675 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D279 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,672 T1T2T3T1T2T3T1T2T3
NSCLC_40408481__PCF_CODEX__C_50 NSCLC_40408481 · PCF / CODEX / PhenoCycler Fusion Lung Primary cancer CODEX 4,669 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D091 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,648 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D251 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,647 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D050 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,629 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D257 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,624 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D207 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,621 T1T2T3T1T2T3T1T2T3
NSCLC_40408481__PCF_CODEX__C_208 NSCLC_40408481 · PCF / CODEX / PhenoCycler Fusion Lung Primary cancer CODEX 4,618 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D046 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,616 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D149 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,606 T1T2T3T1T2T3T1T2T3
NSCLC_40408481__PCF_CODEX__C_199 NSCLC_40408481 · PCF / CODEX / PhenoCycler Fusion Lung Primary cancer CODEX 4,606 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D054 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,604 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D079 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,604 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D070 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,601 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D043 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,594 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D063 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,593 T1T2T3T1T2T3T1T2T3
NSCLC_40408481__PCF_CODEX__C_125 NSCLC_40408481 · PCF / CODEX / PhenoCycler Fusion Lung Primary cancer CODEX 4,575 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D135 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,551 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D039 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,550 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D198 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,540 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D221 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,530 T1T2T3T1T2T3T1T2T3
NSCLC_40408481__PCF_CODEX__C_202 NSCLC_40408481 · PCF / CODEX / PhenoCycler Fusion Lung Primary cancer CODEX 4,530 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D367 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,526 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D412 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,525 T1T2T3T1T2T3T1T2T3
NSCLC_40408481__PCF_CODEX__C_164 NSCLC_40408481 · PCF / CODEX / PhenoCycler Fusion Lung Primary cancer CODEX 4,525 T1T2T3T1T2T3T1T2T3
NSCLC_40408481__PCF_CODEX__C_245 NSCLC_40408481 · PCF / CODEX / PhenoCycler Fusion Lung Primary cancer CODEX 4,524 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D001 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,517 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D113 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,512 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D316 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,505 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D052 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,497 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D413 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,480 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D261 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,475 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D217 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,463 T1T2T3T1T2T3T1T2T3
NSCLC_40408481__PCF_CODEX__C_251 NSCLC_40408481 · PCF / CODEX / PhenoCycler Fusion Lung Primary cancer CODEX 4,462 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D074 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,453 T1T2T3T1T2T3T1T2T3
NSCLC_40408481__PCF_CODEX__C_222 NSCLC_40408481 · PCF / CODEX / PhenoCycler Fusion Lung Primary cancer CODEX 4,449 T1T2T3T1T2T3T1T2T3
LUAD_36725934__IMC__LUAD_D318 LUAD_36725934 · IMC / Imaging Mass Cytometry Lung Primary cancer IMC 4,448 T1T2T3T1T2T3T1T2T3