scAtria single-cell spatial atlas resource

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View by ?Dataset view shows one row per deployed dataset. Sample view shows one row per sample and is better for organ, disease, and spatial availability checks.
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Filter scope 2,620 matches · sample view
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Organ: Lymphoid tissue × 2,620 matches Download sample CSV
Sample Organ Disease state ?Broad public sample state used for filtering and comparison. Technique Cells ?Number of individually resolved single-cell observations included for the record. Spatial module ?D, I, and T indicate Domains, Interaction, and Topology outputs. Tier badges show ready ontology levels when detailed availability is available.
HNSCC_41616773__Other_ST__TMA1_reg076 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 22,582 T1T2T3T1T2T3T1T2T3
DLBCL_41874448__PCF_CODEX__DLBCL_41874448_DFCI_12.1 DLBCL_41874448 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 22,381 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__F3 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 22,145 T1T2T3T1T2T3T1T2T3
HNSCCValidation_41616773__PCF_CODEX__E10 HNSCC_41616773 PCF validation cohort Lymphoid tissue Primary cancer CODEX 22,094 T1T2T3T1T2T3T1T2T3
cHL_41923627__PCF_CODEX__Rochester_10_pos cHL_41923627 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 22,066 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg075 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 21,860 T1T2T3T1T2T3T1T2T3
cHL_41923627__PCF_CODEX__Tubingen_31_pos cHL_41923627 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 21,856 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg059 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 21,755 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg040 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 21,723 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg070 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 21,295 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg039 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 21,284 T1T2T3T1T2T3T1T2T3
DLBCL_41874448__PCF_CODEX__DLBCL_41874448_DFCI_7.1 DLBCL_41874448 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 21,013 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg093 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 20,832 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__F12 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 20,339 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__E6 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 20,311 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg086 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 20,130 T1T2T3T1T2T3T1T2T3
HNSCCValidation_41616773__PCF_CODEX__B2 HNSCC_41616773 PCF validation cohort Lymph node metastasis Metastatic cancer CODEX 19,794 T1T2T3T1T2T3T1T2T3
DLBCL_41874448__PCF_CODEX__DLBCL_41874448_DFCI_2.2 DLBCL_41874448 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 19,565 T1T2T3T1T2T3T1T2T3
DLBCL_41874448__PCF_CODEX__DLBCL_41874448_DFCI_15.2 DLBCL_41874448 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 19,518 T1T2T3T1T2T3T1T2T3
HNSCCValidation_41616773__PCF_CODEX__G10 HNSCC_41616773 PCF validation cohort Lymph node metastasis Metastatic cancer CODEX 19,042 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__C13 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 18,777 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg065 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 18,639 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg012 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 18,567 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg056 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 18,427 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg049 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 18,321 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg080 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 18,306 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg115 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 18,277 T1T2T3T1T2T3T1T2T3
cHL_41923627__PCF_CODEX__Rochester_9_pos cHL_41923627 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 17,163 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg016 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 17,105 T1T2T3T1T2T3T1T2T3
DLBCL_41874448__PCF_CODEX__DLBCL_41874448_DFCI_8.1 DLBCL_41874448 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 17,014 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg133 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 16,543 T1T2T3T1T2T3T1T2T3
cHL_41923627__PCF_CODEX__Rochester_5_pos cHL_41923627 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 16,370 T1T2T3T1T2T3T1T2T3
DLBCL_41874448__PCF_CODEX__DLBCL_41874448_DFCI_3.2 DLBCL_41874448 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 16,352 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg095 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 16,244 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg084 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 15,823 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__D11 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 15,500 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg105 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 15,229 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__C5 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 15,087 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__G6 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 15,076 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg126 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 14,924 T1T2T3T1T2T3T1T2T3
HNSCCHealthyLN_41616773__PCF_CODEX__B12 HNSCC_41616773 PCF healthy lymph node cohort Lymphoid tissue Healthy/control CODEX 14,888 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg123 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 14,869 T1T2T3T1T2T3T1T2T3
DLBCL_41874448__PCF_CODEX__DLBCL_41874448_DFCI_17.1 DLBCL_41874448 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 14,160 T1T2T3T1T2T3T1T2T3
HNSCCValidation_41616773__PCF_CODEX__B9 HNSCC_41616773 PCF validation cohort Lymph node metastasis Metastatic cancer CODEX 13,775 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg017 HNSCC_41616773 · Other ST Lymphoid tissue Healthy/control Other ST 13,563 T1T2T3T1T2T3T1T2T3
HNSCCValidation_41616773__PCF_CODEX__A2 HNSCC_41616773 PCF validation cohort Lymph node metastasis Metastatic cancer CODEX 13,294 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg004 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 13,134 T1T2T3T1T2T3T1T2T3
cHL_41923627__PCF_CODEX__Rochester_11_neg cHL_41923627 · PCF / CODEX / PhenoCycler Fusion Lymphoid tissue Primary cancer CODEX 12,692 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg112 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 12,468 T1T2T3T1T2T3T1T2T3
HNSCC_41616773__Other_ST__TMA1_reg055 HNSCC_41616773 · Other ST Lymph node metastasis Metastatic cancer Other ST 12,170 T1T2T3T1T2T3T1T2T3