scAtria single-cell spatial atlas resource

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Dataset Sample
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61 Samples
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Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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Organ: Musculoskeletal × 61 matches 1 curated Download sample CSV
Xenium Spatial transcriptomics Curated

XeniumMulti_10xGenomics__Xenium__Xenium_V1_hBone_nondiseased_section

Dataset: Xenium Human Multi-Tissue and Cancer Panel showcase

Organ: Musculoskeletal

Disease detail: Healthy human

Disease state: Healthy/control

Cells
33,801
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F001

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
2,766
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F002

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
1,617
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F003

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
1,762
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F004

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
3,143
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F005

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
2,691
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F006

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
1,625
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F007

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
1,701
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F008

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
1,033
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F009

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
2,573
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F010

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
1,685
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F011

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
611
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.