scAtria single-cell spatial atlas resource

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View by ?Dataset view shows one row per deployed dataset. Sample view shows one row per sample and is better for organ, disease, and spatial availability checks.
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Organ: Head and neck × 336 matches 292 curated Download sample CSV
Sample Organ Disease state ?Broad public sample state used for filtering and comparison. Technique Cells ?Number of individually resolved single-cell observations included for the record. Spatial module ?D, I, and T indicate Domains, Interaction, and Topology outputs. Tier badges show ready ontology levels when detailed availability is available. Curation ?Curated records have standardized ontology labels and normalized metadata. Source records are ingested but not fully standardized yet.
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg001 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,013 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg003 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,162 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg004 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 991 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg011 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,533 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg012 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,349 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg017 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,876 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg018 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,429 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg019 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 3,347 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg024 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,161 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg025 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,705 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg028 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,316 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg029 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,623 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg031 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 3,101 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg032 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,990 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg035 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 3,094 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg036 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 3,830 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg040 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 1,239 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg043 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,346 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg044 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 1,667 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg047 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 1,170 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg048 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 1,539 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg054 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 3,545 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg055 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,960 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg058 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,524 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg059 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,523 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg065 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,659 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg066 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,941 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg068 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 1,100 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg069 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 1,616 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg072 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,000 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg073 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 1,895 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg079 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,686 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg080 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,489 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg083 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 3,746 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S1reg084 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,744 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S2reg004 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,939 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S2reg005 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,917 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S2reg006 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 3,165 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S2reg008 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,272 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S2reg009 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,964 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S2reg010 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 3,207 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S2reg015 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 4,584 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S2reg016 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 4,384 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S2reg019 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,660 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S2reg020 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 4,215 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S2reg026 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 3,321 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S2reg027 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,823 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S2reg028 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 3,193 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S2reg037 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,554 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__521_S2reg038 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 3,167 T1T2T3T1T2T3T1T2T3 Curated