scAtria single-cell spatial atlas resource

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View by ?Dataset view shows one row per deployed dataset. Sample view shows one row per sample and is better for organ, disease, and spatial availability checks.
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Organ: Head and neck × 336 matches 292 curated Download sample CSV
Sample Organ Disease state ?Broad public sample state used for filtering and comparison. Technique Cells ?Number of individually resolved single-cell observations included for the record. Spatial module ?D, I, and T indicate Domains, Interaction, and Topology outputs. Tier badges show ready ontology levels when detailed availability is available. Curation ?Curated records have standardized ontology labels and normalized metadata. Source records are ingested but not fully standardized yet.
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg043 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,780 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg047 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,404 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg048 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 1,711 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg049 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,353 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg054 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,867 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg055 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,348 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg056 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 1,030 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg061 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,099 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg062 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,680 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg063 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,185 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg068 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 1,649 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg069 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 1,408 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S1reg070 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 1,481 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg007 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 1,493 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg008 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,788 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg009 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 1,390 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg014 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 3,323 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg015 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,531 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg016 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 3,106 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg021 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,242 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg022 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,830 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg023 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,777 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg027 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 3,826 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg032 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,010 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg033 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 3,539 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg035 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 1,116 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg036 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 1,034 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg038 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,497 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg039 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 1,970 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg040 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,964 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg047 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 3,667 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg048 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 3,411 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg051 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 3,119 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg052 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,936 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg053 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,210 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg055 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,284 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg056 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 1,592 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg063 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 3,760 T1T2T3T1T2T3T1T2T3 Curated
HNSCCDiscovery_41616773__PCF_CODEX__523_S2reg064 HNSCC_41616773 PCF discovery cohort Head and neck Primary cancer CODEX 2,745 T1T2T3T1T2T3T1T2T3 Curated
HNSCCValidation_41616773__PCF_CODEX__A8 HNSCC_41616773 PCF validation cohort Head and neck Primary cancer CODEX 13,158 T1T2T3T1T2T3T1T2T3 Curated
HNSCCValidation_41616773__PCF_CODEX__B8 HNSCC_41616773 PCF validation cohort Head and neck Primary cancer CODEX 8,169 T1T2T3T1T2T3T1T2T3 Curated
HNSCCValidation_41616773__PCF_CODEX__C1 HNSCC_41616773 PCF validation cohort Head and neck Primary cancer CODEX 3,525 T1T2T3T1T2T3T1T2T3 Curated
HNSCCValidation_41616773__PCF_CODEX__C8 HNSCC_41616773 PCF validation cohort Head and neck Primary cancer CODEX 16,816 T1T2T3T1T2T3T1T2T3 Curated
HNSCCValidation_41616773__PCF_CODEX__D1 HNSCC_41616773 PCF validation cohort Head and neck Primary cancer CODEX 14,465 T1T2T3T1T2T3T1T2T3 Curated
HNSCCValidation_41616773__PCF_CODEX__D8 HNSCC_41616773 PCF validation cohort Head and neck Primary cancer CODEX 10,294 T1T2T3T1T2T3T1T2T3 Curated
HNSCCValidation_41616773__PCF_CODEX__D9 HNSCC_41616773 PCF validation cohort Head and neck Primary cancer CODEX 9,945 T1T2T3T1T2T3T1T2T3 Curated
HNSCCValidation_41616773__PCF_CODEX__E1 HNSCC_41616773 PCF validation cohort Head and neck Primary cancer CODEX 9,499 T1T2T3T1T2T3T1T2T3 Curated
HNSCCValidation_41616773__PCF_CODEX__E9 HNSCC_41616773 PCF validation cohort Head and neck Primary cancer CODEX 11,500 T1T2T3T1T2T3T1T2T3 Curated
HNSCCValidation_41616773__PCF_CODEX__F1 HNSCC_41616773 PCF validation cohort Head and neck Primary cancer CODEX 13,351 T1T2T3T1T2T3T1T2T3 Curated
HNSCCValidation_41616773__PCF_CODEX__G9 HNSCC_41616773 PCF validation cohort Head and neck Primary cancer CODEX 17,154 T1T2T3T1T2T3T1T2T3 Curated