scAtria single-cell spatial atlas resource

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View by ?Dataset view shows one row per deployed dataset. Sample view shows one row per sample and is better for organ, disease, and spatial availability checks.
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Organ: Ovary × 157 matches 156 curated Download sample CSV
Visium HD Spatial transcriptomics Curated

Visium_HD_10xGenomics__Visium_HD__Visium_HD_3prime_Human_Ovarian_Cancer

Dataset: 10x Genomics Visium HD showcase

Organ: Ovary

Disease detail: Ovarian cancer (clear cell adenocarcinoma)

Disease state: Primary cancer

Cells
200,764
Curation
Curated
Spatial
Open dataset Spatial outputs not yet published for this sample.
Visium HD Spatial transcriptomics Curated

Visium_HD_10xGenomics__Visium_HD__Visium_HD_3prime_Human_Ovarian_Cancer_FF

Dataset: 10x Genomics Visium HD showcase

Organ: Ovary

Disease detail: Ovarian cancer (papillary serous carcinoma)

Disease state: Primary cancer

Cells
258,911
Curation
Curated
Spatial
Open dataset Spatial outputs not yet published for this sample.
Visium HD Spatial transcriptomics Curated

Visium_HD_10xGenomics__Visium_HD__Visium_HD_3prime_Human_Ovarian_Cancer_FF_Min_Depth

Dataset: 10x Genomics Visium HD showcase

Organ: Ovary

Disease detail: Ovarian cancer (papillary serous carcinoma)

Disease state: Primary cancer

Cells
258,896
Curation
Curated
Spatial
Open dataset Spatial outputs not yet published for this sample.
Visium HD Spatial transcriptomics Curated

Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Ovarian_Cancer_FF

Dataset: 10x Genomics Visium HD showcase

Organ: Ovary

Disease detail: Ovarian cancer (papillary serous carcinoma)

Disease state: Primary cancer

Cells
183,450
Curation
Curated
Spatial
Open dataset Spatial outputs not yet published for this sample.
Visium HD Spatial transcriptomics Curated

Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Ovarian_Cancer_FF_Min_Depth

Dataset: 10x Genomics Visium HD showcase

Organ: Ovary

Disease detail: Ovarian cancer (papillary serous carcinoma)

Disease state: Primary cancer

Cells
183,449
Curation
Curated
Spatial
Open dataset Spatial outputs not yet published for this sample.
Xenium Spatial transcriptomics Curated

Xenium5k_10xGenomics__Xenium__Xenium_Prime_Human_Ovary_Cancer_FF

Dataset: 10x Genomics Xenium Prime 5K showcase

Organ: Ovary

Disease detail: Ovarian cancer (papillary serous carcinoma)

Disease state: Primary cancer

Cells
200,900
Curation
Curated
Spatial
Open dataset Spatial outputs not yet published for this sample.
Xenium Spatial transcriptomics Curated

Xenium5k_10xGenomics__Xenium__Xenium_Prime_Human_Ovary_FF

Dataset: 10x Genomics Xenium Prime 5K showcase

Organ: Ovary

Disease detail: Ovarian cancer (adenocarcinoma)

Disease state: Primary cancer

Cells
1,157,659
Curation
Curated
Spatial
Open dataset Spatial outputs not yet published for this sample.
Xenium Spatial transcriptomics Curated

Xenium5k_10xGenomics__Xenium__Xenium_Prime_Ovarian_Cancer_FFPE_XRrun

Dataset: 10x Genomics Xenium Prime 5K showcase

Organ: Ovary

Disease detail: Ovarian cancer (papillary serous carcinoma)

Disease state: Primary cancer

Cells
407,124
Curation
Curated
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

HGSC_39179931__CosMx_SMI__HGSC1

Dataset: HGSC_39179931 · CosMx SMI / NanoString SMI

Organ: Ovary

Disease detail: High-grade serous ovarian carcinoma

Disease state: Primary cancer

Cells
542,559
Curation
Curated
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

HGSC_39179931__CosMx_SMI__HGSC113

Dataset: HGSC_39179931 · CosMx SMI / NanoString SMI

Organ: Ovary

Disease detail: High-grade serous ovarian carcinoma

Disease state: Primary cancer

Cells
98,482
Curation
Curated
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

HGSC_39179931__CosMx_SMI__HGSC2

Dataset: HGSC_39179931 · CosMx SMI / NanoString SMI

Organ: Ovary

Disease detail: High-grade serous ovarian carcinoma

Disease state: Primary cancer

Cells
211,472
Curation
Curated
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

HGSC_39179931__CosMx_SMI__HGSC8

Dataset: HGSC_39179931 · CosMx SMI / NanoString SMI

Organ: Ovary

Disease detail: High-grade serous ovarian carcinoma

Disease state: Primary cancer

Cells
294,699
Curation
Curated
Spatial
Open dataset Spatial outputs not yet published for this sample.