scAtria single-cell spatial atlas resource

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Dataset Sample
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116 Samples
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Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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Organ: Pancreas × 116 matches 115 curated Download sample CSV
Visium HD Spatial transcriptomics Curated

Visium_HD_10xGenomics__Visium_HD__Visium_HD_3prime_Human_Pancreatic_Cancer

Dataset: 10x Genomics Visium HD showcase

Organ: Pancreas

Disease detail: Pancreatic cancer

Disease state: Primary cancer

Cells
252,214
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

CosMxWTx_Bruker__CosMx_SMI__CosMxPancreasWTx_Bruker

Dataset: Bruker CosMx WTx FFPE showcase

Organ: Pancreas

Disease detail: Normal/healthy pancreas control

Disease state: Healthy/control

Cells
413,373
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

PDAC_39227743__CosMx_SMI__PDAC_39227743_T1-b

Dataset: PDAC_39227743 · CosMx SMI / NanoString SMI

Organ: Pancreas

Disease detail: Pancreatic ductal adenocarcinoma

Disease state: Primary cancer

Cells
31,084
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

PDAC_39227743__CosMx_SMI__PDAC_39227743_T2-b

Dataset: PDAC_39227743 · CosMx SMI / NanoString SMI

Organ: Pancreas

Disease detail: Pancreatic ductal adenocarcinoma

Disease state: Primary cancer

Cells
43,658
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

PDAC_39227743__CosMx_SMI__PDAC_39227743_T3-b

Dataset: PDAC_39227743 · CosMx SMI / NanoString SMI

Organ: Pancreas

Disease detail: Pancreatic ductal adenocarcinoma

Disease state: Primary cancer

Cells
33,800
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

PDAC_39227743__CosMx_SMI__PDAC_39227743_T4-a

Dataset: PDAC_39227743 · CosMx SMI / NanoString SMI

Organ: Pancreas

Disease detail: Pancreatic ductal adenocarcinoma

Disease state: Primary cancer

Cells
55,369
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

PDAC_39227743__CosMx_SMI__PDAC_39227743_T4-b

Dataset: PDAC_39227743 · CosMx SMI / NanoString SMI

Organ: Pancreas

Disease detail: Pancreatic ductal adenocarcinoma

Disease state: Primary cancer

Cells
42,432
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

PDAC_39227743__CosMx_SMI__PDAC_39227743_T5-a

Dataset: PDAC_39227743 · CosMx SMI / NanoString SMI

Organ: Pancreas

Disease detail: Pancreatic ductal adenocarcinoma

Disease state: Primary cancer

Cells
43,794
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

PDAC_39227743__CosMx_SMI__PDAC_39227743_T6-b

Dataset: PDAC_39227743 · CosMx SMI / NanoString SMI

Organ: Pancreas

Disease detail: Pancreatic ductal adenocarcinoma

Disease state: Primary cancer

Cells
12,473
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.