scAtria single-cell spatial atlas resource

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1,128 Samples
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Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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Sample Organ Disease state Technique Cells Spatial module Curation
BRCA_35122013__IMC__MB-0212__core1__image237 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 192 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0212__core1__image383 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 36 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0214__core1__image329 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 115 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0214__core1__image443 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 99 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0216__core1__image384 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,365 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0218__core1__image103 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 163 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0218__core1__image113 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 653 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0218__core1__image124 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 160 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0220__core1__image305 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 620 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0221__core1__image105 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 546 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0221__core2__image469 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,564 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0222__core1__image202 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,124 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0223__core1__image454 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 759 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0224__core1__image531 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 568 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0225__core1__image391 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,036 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0227__core1__image246 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,357 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0228__core1__image176 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 53 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0231__core1__image17 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 458 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0232__core1__image545 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 847 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0233__core1__image500 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 369 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0235__core1__image408 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,405 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0236__core1__image264 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 907 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0237__core1__image247 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,007 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0238__core1__image555 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,771 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0239__core1__image489 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 110 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0239__core1__image492 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 421 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0240__core1__image511 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,026 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0241__core1__image272 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 149 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0241__core1__image289 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 194 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0241__core2__image496 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 141 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0242__core1__image158 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 245 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0243__core1__image387 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,300 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0244__core1__image519 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 187 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0245__core1__image388 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,282 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0246__core1__image162 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 859 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0248__core1__image362 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 916 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0249__core1__image532 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 474 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0250__core1__image306 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,226 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0251__core1__image478 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 68 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0252__core1__image447 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 794 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0254__core1__image257 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 267 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0255__core1__image440 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 932 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0256__core1__image392 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 801 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0258__core1__image239 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 499 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0259__core1__image422 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 47 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0259__core1__image6 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 724 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0260__core1__image525 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,016 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0262__core1__image372 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,250 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0263__core1__image514 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 755 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0264__core1__image471 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 548 T1T2T3T1T2T3T1T2T3 Curated