scAtria single-cell spatial atlas resource

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1,128 Samples
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Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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Sample Organ Disease state Technique Cells Spatial module Curation
BRCA_35122013__IMC__MB-0265__core1__image40 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 47 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0268__core1__image385 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 633 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0269__core1__image415 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,037 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0270__core1__image220 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,074 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0271__core1__image195 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 983 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0272__core1__image285 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,298 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0273__core1__image351 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 70 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0274__core1__image386 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 519 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0275__core1__image203 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 418 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0277__core1__image173 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 959 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0278__core1__image7 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 854 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0279__core1__image91 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,315 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0280__core1__image406 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 568 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0282__core1__image430 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 282 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0282__core1__image433 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 110 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0283__core1__image148 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 45 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0283__core2__image540 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,952 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0285__core1__image476 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,493 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0286__core1__image404 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 308 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0287__core1__image419 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 861 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0288__core1__image347 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 211 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0289__core1__image221 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 808 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0290__core1__image481 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 622 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0291__core1__image437 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,366 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0292__core1__image10 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 922 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0294__core1__image395 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 617 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0296__core1__image411 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 800 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0300__core1__image286 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 500 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0301__core1__image287 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 425 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0301__core1__image325 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 642 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0302__core1__image142 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 100 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0304__core1__image187 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,433 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0305__core1__image11 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 546 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0305__core1__image307 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 700 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0307__core1__image106 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,280 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0308__core1__image21 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,116 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0309__core1__image551 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 963 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0311__core1__image31 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 485 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0312__core1__image178 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,876 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0314__core1__image472 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,630 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0316__core1__image494 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 953 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0318__core1__image332 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,380 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0319__core1__image339 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,150 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0320__core1__image315 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 847 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0321__core1__image378 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 374 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0321__core2__image412 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,413 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0322__core1__image65 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 856 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0322__core2__image291 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 861 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0324__core1__image455 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,267 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0325__core1__image405 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,025 T1T2T3T1T2T3T1T2T3 Curated