scAtria single-cell spatial atlas resource

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Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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Sample Organ Disease state Technique Cells Spatial module Curation
NSCLC_40220761__CosMx_SMI__Section_16 NSCLC_40220761 · CosMx SMI / NanoString SMI Lung Primary cancer CosMx 57,435 Source
NSCLC_40220761__CosMx_SMI__Section_22 NSCLC_40220761 · CosMx SMI / NanoString SMI Lung Primary cancer CosMx 59,208 Source
NSCLC_40220761__CosMx_SMI__Section_28 NSCLC_40220761 · CosMx SMI / NanoString SMI Lung Primary cancer CosMx 59,564 Source
NSCLC_40220761__CosMx_SMI__Section_34 NSCLC_40220761 · CosMx SMI / NanoString SMI Lung Primary cancer CosMx 56,959 Source
Oral_41663813__Xenium__Oral_41663813_H1 Oral_41663813 · Xenium Head and neck Healthy/control Xenium 16,985 Source
Oral_41663813__Xenium__Oral_41663813_H2a Oral_41663813 · Xenium Head and neck Healthy/control Xenium 14,819 Source
Oral_41663813__Xenium__Oral_41663813_H2b Oral_41663813 · Xenium Head and neck Healthy/control Xenium 5,593 Source
Oral_41663813__Xenium__Oral_41663813_H3a Oral_41663813 · Xenium Head and neck Healthy/control Xenium 4,247 Source
Oral_41663813__Xenium__Oral_41663813_H3b Oral_41663813 · Xenium Head and neck Healthy/control Xenium 4,601 Source
Oral_41663813__Xenium__Oral_41663813_H4 Oral_41663813 · Xenium Head and neck Healthy/control Xenium 6,658 Source
Oral_41663813__Xenium__Oral_41663813_H4a Oral_41663813 · Xenium Head and neck Healthy/control Xenium 13,955 Source
Oral_41663813__Xenium__Oral_41663813_H4b Oral_41663813 · Xenium Head and neck Healthy/control Xenium 18,033 Source
Oral_41663813__Xenium__Oral_41663813_H5 Oral_41663813 · Xenium Head and neck Healthy/control Xenium 23,249 Source
Oral_41663813__Xenium__Oral_41663813_H6 Oral_41663813 · Xenium Head and neck Healthy/control Xenium 18,428 Source
Oral_41663813__Xenium__Oral_41663813_H7a Oral_41663813 · Xenium Head and neck Healthy/control Xenium 6,191 Source
Oral_41663813__Xenium__Oral_41663813_H7b Oral_41663813 · Xenium Head and neck Healthy/control Xenium 9,998 Source
Oral_41663813__Xenium__Oral_41663813_H8 Oral_41663813 · Xenium Head and neck Healthy/control Xenium 27,704 Source
Oral_41663813__Xenium__Oral_41663813_H9a Oral_41663813 · Xenium Head and neck Healthy/control Xenium 17,161 Source
Oral_41663813__Xenium__Oral_41663813_H9b Oral_41663813 · Xenium Head and neck Healthy/control Xenium 20,980 Source
Oral_41663813__Xenium__Oral_41663813_P1 Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 28,555 Source
Oral_41663813__Xenium__Oral_41663813_P10 Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 15,455 Source
Oral_41663813__Xenium__Oral_41663813_P12a Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 12,788 Source
Oral_41663813__Xenium__Oral_41663813_P12b Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 3,793 Source
Oral_41663813__Xenium__Oral_41663813_P13a Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 4,674 Source
Oral_41663813__Xenium__Oral_41663813_P13b Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 7,208 Source
Oral_41663813__Xenium__Oral_41663813_P13c Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 9,146 Source
Oral_41663813__Xenium__Oral_41663813_P14a Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 45,548 Source
Oral_41663813__Xenium__Oral_41663813_P14b Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 40,763 Source
Oral_41663813__Xenium__Oral_41663813_P15 Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 15,682 Source
Oral_41663813__Xenium__Oral_41663813_P2a Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 22,328 Source
Oral_41663813__Xenium__Oral_41663813_P2b Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 24,866 Source
Oral_41663813__Xenium__Oral_41663813_P2c Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 4,112 Source
Oral_41663813__Xenium__Oral_41663813_P2d Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 1,787 Source
Oral_41663813__Xenium__Oral_41663813_P3 Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 17,771 Source
Oral_41663813__Xenium__Oral_41663813_P4a Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 7,668 Source
Oral_41663813__Xenium__Oral_41663813_P4b Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 23,554 Source
Oral_41663813__Xenium__Oral_41663813_P5a Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 6,610 Source
Oral_41663813__Xenium__Oral_41663813_P5b Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 10,503 Source
Oral_41663813__Xenium__Oral_41663813_P5c Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 20,385 Source
Oral_41663813__Xenium__Oral_41663813_P6 Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 54,771 Source
Oral_41663813__Xenium__Oral_41663813_P7a Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 9,388 Source
Oral_41663813__Xenium__Oral_41663813_P7b Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 12,222 Source
Oral_41663813__Xenium__Oral_41663813_P8 Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 35,013 Source
Oral_41663813__Xenium__Oral_41663813_P9a Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 5,014 Source
Oral_41663813__Xenium__Oral_41663813_P9b Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 19,836 Source
Oral_41663813__Xenium__Oral_41663813_P9c Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 16,249 Source
Oral_41663813__Xenium__Oral_41663813_P9d Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 1,954 Source
Oral_41663813__Xenium__Oral_41663813_P9e Oral_41663813 · Xenium Head and neck Non-cancer disease Xenium 24,232 Source
PDAC_41916312__Xenium__AF-2693_SNV_PDAC_PANCREAS__Region_3 PDAC_41916312 · Xenium Pancreas Primary cancer Xenium 77,695 Source
RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F001 RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI Musculoskeletal Non-cancer disease CosMx 2,766 Source