scAtria single-cell spatial atlas resource

Browse

? Browse is the search page: type a query, then refine by organ, technique, modality, curation, and dataset/sample view.
Dataset Sample
Card Table
1,128 Samples
SearchFiltered
Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
Filter scope 1,128 matches · sample view
Reset
Columns 7
Sample table columns Selections persist in the URL and manifest download.
Reset columns
Search: breast × 1,128 matches 1,128 curated Download sample CSV
Sample Organ Disease state Technique Cells Spatial module Curation
BRCA_35122013__IMC__MB-0389__core1__image473 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,502 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0390__core1__image243 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 951 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0391__core1__image226 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 944 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0392__core1__image280 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 186 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0393__core1__image294 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,181 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0394__core1__image140 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 39 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0394__core2__image417 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,201 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0394__core2__image485 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,024 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0395__core1__image274 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 758 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0396__core1__image265 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,206 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0397__core1__image252 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,275 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0398__core1__image242 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 707 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0399__core1__image273 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 826 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0400__core1__image229 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,138 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0401__core1__image261 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 923 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0404__core1__image251 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 600 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0405__core1__image504 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 819 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0405__core1__image507 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 263 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0406__core1__image241 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 307 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0408__core1__image215 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,155 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0409__core1__image206 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,166 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0410__core1__image423 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,138 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0411__core1__image107 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,158 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0412__core1__image196 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 919 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0413__core1__image480 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,845 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0414__core1__image184 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,803 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0415__core1__image167 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 935 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0416__core1__image224 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 153 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0416__core1__image225 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 204 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0417__core1__image214 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,031 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0418__core1__image205 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 817 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0419__core1__image193 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,247 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0420__core1__image181 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 532 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0421__core1__image223 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 800 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0422__core1__image213 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 894 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0423__core1__image200 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 821 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0425__core1__image192 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,786 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0426__core1__image179 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,336 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0427__core1__image146 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 601 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0427__core1__image147 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 206 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0429__core1__image75 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,943 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0431__core1__image29 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 623 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0432__core1__image521 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 374 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0433__core1__image166 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 64 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0433__core1__image2 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 829 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0434__core1__image143 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,228 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0438__core1__image346 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 831 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0439__core1__image73 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,307 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0440__core1__image24 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 830 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0441__core1__image163 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 642 T1T2T3T1T2T3T1T2T3 Curated