scAtria single-cell spatial atlas resource

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1,128 Samples
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Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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Sample Organ Disease state Technique Cells Spatial module Curation
BRCA_35122013__IMC__MB-0442__core1__image375 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,400 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0443__core1__image212 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 935 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0444__core1__image139 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 537 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0445__core1__image467 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,368 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0446__core1__image102 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,018 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0448__core1__image69 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 942 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0449__core1__image20 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 976 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0451__core1__image50 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 913 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0453__core1__image468 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 874 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0454__core1__image397 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,195 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0455__core1__image281 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 494 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0455__core1__image343 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 605 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0456__core1__image328 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 270 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0457__core1__image171 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 758 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0458__core1__image516 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 444 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0459__core1__image453 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,265 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0460__core1__image390 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 242 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0461__core1__image403 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,630 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0462__core1__image321 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 372 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0463__core1__image141 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,592 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0464__core1__image509 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 175 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0465__core1__image446 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,681 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0467__core1__image376 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 886 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0468__core1__image304 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 337 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0469__core1__image337 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,050 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0470__core1__image92 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 865 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0470__core1__image94 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 62 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0471__core1__image104 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 7 Curated
BRCA_35122013__IMC__MB-0473__core1__image316 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,096 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0474__core1__image310 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,579 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0475__core1__image292 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,742 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0476__core1__image268 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,194 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0477__core1__image79 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 46 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0478__core1__image414 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 31 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0479__core1__image300 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 455 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0480__core1__image463 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 593 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0481__core1__image331 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,685 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0482__core1__image398 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 991 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0483__core1__image323 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,041 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0484__core1__image277 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,455 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0485__core1__image267 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,302 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0486__core1__image249 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,088 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0487__core1__image3 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 967 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0488__core1__image313 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,390 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0490__core1__image308 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,149 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0490__core1__image309 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 154 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0491__core1__image296 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,526 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0492__core1__image276 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,096 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0494__core1__image260 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,546 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0495__core1__image250 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,122 T1T2T3T1T2T3T1T2T3 Curated