scAtria single-cell spatial atlas resource

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Sample Organ Disease state Technique Cells Spatial module Curation
BRCA_31959985__IMC__BaselTMA_SP41_274_X14Y1__gate013 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 599 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_282_X2Y3__gate086 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 89 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_282_X2Y3__gate087 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 68 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_284_X8Y2__gate070 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 108 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_31_X16Y2__gate022 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 207 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_45_X4Y3__gate094 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 87 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_52_X10Y2__gate079 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 9 Curated
BRCA_31959985__IMC__BaselTMA_SP41_52_X10Y2__gate080 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 18 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_58_X16Y1__gate023 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 521 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_61_X4Y4__gate093 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 58 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_68_X10Y1__gate081 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 294 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_72_X12Y1__gate003 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 475 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP41_83_X14Y2__gate012 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 2,042 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_0_X2Y1__gate251 BRCA_31959985 · IMC / Imaging Mass Cytometry Liver Healthy/control IMC 2,129 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_105_X10Y1__gate182 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 1,304 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_120_X6Y2__gate210 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 807 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_136_X10Y4__gate179 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 968 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_145_X2Y4__gate237 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 55 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_145_X2Y4__gate238 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 25 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_154_X8Y4__gate215 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 645 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_156_X16Y1__gate155 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 692 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_16_X4Y4__gate244 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 221 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_215_X4Y1__gate247 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 159 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_217_X2Y3__gate239 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 2,060 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_240_X10Y2__gate181 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 628 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_251_X16Y2__gate152 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 436 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_253_X14Y2__gate147 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 1,319 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_25_X4Y2__gate246 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 328 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_265_X14Y1__gate153 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 141 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_275_X6Y4__gate208 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 53 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_28_X12Y2__gate173 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 2,363 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_30_X8Y3__gate216 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 400 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_36_X6Y1__gate211 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 576 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_64_X14Y4__gate146 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 4,833 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_6_X12Y1__gate174 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 67 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_70_X6Y3__gate209 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 187 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_74_X16Y3__gate151 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 256 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_80_X4Y3__gate245 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 175 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_81_X12Y4__gate187 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 736 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_84_X8Y1__gate217 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 205 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_91_X12Y3__gate172 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 574 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_96_X10Y3__gate180 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 700 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_0_X1Y1__gate370 BRCA_31959985 · IMC / Imaging Mass Cytometry Liver Healthy/control IMC 2,510 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_0_X2Y1__gate371 BRCA_31959985 · IMC / Imaging Mass Cytometry Liver Healthy/control IMC 4,433 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_102_X2Y4__gate363 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 461 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_103_X6Y4__gate322 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 179 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_116_X14Y4__gate264 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 862 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_116_X4Y4__gate365 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 2,910 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_132_X14Y1__gate252 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 820 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_137_X9Y3__gate297 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 4,305 T1T2T3T1T2T3T1T2T3 Curated