scAtria single-cell spatial atlas resource

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1,128 Samples
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Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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Sample Organ Disease state Technique Cells Spatial module Curation
BRCA_35122013__IMC__MB-0558__core1__image365 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 67 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0559__core1__image159 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 390 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0559__core1__image174 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 63 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0562__core1__image180 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,266 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0563__core1__image9 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,247 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0565__core1__image373 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,231 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0568__core1__image204 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,181 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0569__core1__image248 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 926 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0570__core1__image465 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,544 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0571__core1__image434 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 681 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0573__core1__image352 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 670 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0574__core1__image199 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,375 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0575__core1__image191 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,812 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0576__core1__image177 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,308 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0577__core1__image100 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 282 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0578__core1__image161 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,604 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0579__core1__image198 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,787 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0580__core1__image190 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,632 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0581__core1__image175 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,658 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0582__core1__image154 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,791 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0583__core1__image133 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 274 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0583__core1__image134 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 686 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0583__core2__image207 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,158 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0584__core1__image22 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,078 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0585__core1__image110 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 650 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0586__core1__image444 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 856 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0586__core2__image538 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 795 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0587__core1__image66 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 70 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0588__core1__image19 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,272 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0589__core1__image342 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 590 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0589__core2__image505 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 652 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0590__core1__image431 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 777 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0591__core1__image57 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 74 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0591__core2__image108 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 940 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0593__core1__image14 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 465 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0594__core1__image498 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,353 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0595__core1__image425 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 950 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0596__core1__image129 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,679 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0597__core1__image510 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 897 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0598__core1__image475 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,154 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0599__core1__image438 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,433 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0600__core1__image368 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,486 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0601__core1__image271 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 845 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0602__core1__image39 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 289 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0603__core1__image354 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 821 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0604__core1__image135 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,182 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0605__core1__image12 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 156 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0605__core1__image256 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 634 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0607__core1__image546 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,323 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0608__core1__image132 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,487 T1T2T3T1T2T3T1T2T3 Curated