scAtria single-cell spatial atlas resource

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1,128 Samples
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Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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Sample Organ Disease state Technique Cells Spatial module Curation
BRCA_35122013__IMC__MB-0609__core1__image55 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,344 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0609__core2__image120 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 954 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0610__core1__image111 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,273 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0611__core1__image548 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 440 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0612__core1__image491 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 658 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0613__core1__image98 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,205 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0614__core1__image95 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 747 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0616__core1__image51 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 688 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0618__core1__image530 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 46 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0620__core1__image360 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,316 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0621__core1__image238 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 705 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0621__core1__image85 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 455 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0622__core1__image283 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 190 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0623__core1__image4 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 200 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0623__core1__image464 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 42 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0623__core1__image5 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 90 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0624__core1__image197 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 331 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0625__core1__image189 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,610 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0626__core1__image169 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,339 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0628__core1__image90 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,730 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0629__core1__image137 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 747 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0630__core1__image99 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 133 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0631__core1__image60 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 775 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0633__core1__image76 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,542 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0634__core1__image58 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 49 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0634__core1__image61 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 45 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0635__core1__image16 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 836 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0636__core1__image96 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 524 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0637__core1__image56 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,120 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0638__core1__image554 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 422 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0641__core1__image130 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 785 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0642__core1__image93 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,255 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0643__core1__image53 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,147 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0644__core1__image550 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,312 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0645__core1__image490 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 182 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0646__core1__image506 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,577 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0647__core1__image439 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 170 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0648__core1__image369 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,639 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0650__core1__image418 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,065 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0652__core1__image288 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 770 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0653__core1__image63 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 952 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0654__core1__image82 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 94 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0657__core1__image499 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 798 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0658__core1__image432 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 486 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0659__core1__image361 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 654 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0660__core1__image263 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,063 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0661__core1__image13 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,553 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0662__core1__image101 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,238 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0663__core1__image394 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 567 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35122013__IMC__MB-0664__core1__image426 BRCA_35122013 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,387 T1T2T3T1T2T3T1T2T3 Curated