scAtria single-cell spatial atlas resource

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Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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Search: Spatial transcriptomics × 4,237 matches 4,020 curated Download sample CSV
Sample Organ Disease state Technique Cells Spatial module Curation
BRCA_31959985__IMC__BaselTMA_SP42_217_X2Y3__gate239 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 2,060 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_240_X10Y2__gate181 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 628 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_251_X16Y2__gate152 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 436 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_253_X14Y2__gate147 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 1,319 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_25_X4Y2__gate246 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 328 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_265_X14Y1__gate153 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 141 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_275_X6Y4__gate208 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 53 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_28_X12Y2__gate173 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 2,363 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_30_X8Y3__gate216 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 400 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_36_X6Y1__gate211 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 576 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_64_X14Y4__gate146 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 4,833 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_6_X12Y1__gate174 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 67 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_70_X6Y3__gate209 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 187 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_74_X16Y3__gate151 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 256 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_80_X4Y3__gate245 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 175 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_81_X12Y4__gate187 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 736 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_84_X8Y1__gate217 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 205 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_91_X12Y3__gate172 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 574 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP42_96_X10Y3__gate180 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 700 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_102_X2Y4__gate363 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 461 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_103_X6Y4__gate322 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 179 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_116_X14Y4__gate264 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 862 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_116_X4Y4__gate365 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 2,910 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_132_X14Y1__gate252 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 820 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_137_X9Y3__gate297 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 4,305 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_142_X6Y1__gate320 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 489 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_143_X2Y2__gate353 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 969 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_144_X16Y1__gate255 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 1,678 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_150_X6Y3__gate316 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 206 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_170_X4Y3__gate361 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 589 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_172_X10Y2__gate293 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 204 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_17_X12Y4__gate303 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 521 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_180_X6Y2__gate312 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 108 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_19_X16Y2__gate259 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 276 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_209_X12Y1__gate291 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 285 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_222_X8Y2__gate314 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 107 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_235_X12Y2__gate295 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 1,968 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_241_X8Y3__gate318 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 51 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_243_X14Y3__gate261 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 780 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_244_X4Y1__gate357 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 108 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_250_X2Y3__gate359 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 2,061 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_260_X9Y4__gate301 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 2,590 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_272_X12Y3__gate299 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 673 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_278_X4Y2__gate355 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 1,089 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_4_X16Y3__gate263 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 148 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_50_X8Y1__gate328 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 30 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_79_X8Y4__gate324 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 4,083 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_85_X10Y1__gate309 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 391 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_95_X14Y2__gate257 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 384 T1T2T3T1T2T3T1T2T3 Curated
BRCA_35063072__MIBI_TOF__Point2305 BRCA_35063072 · MIBI-TOF / Multiplexed Ion Beam Imaging Breast Healthy/control MIBI 473 T1T2T3T1T2T3T1T2T3 Curated