scAtria single-cell spatial atlas resource

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Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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Search: BRCA_35063072 × 1,008 matches 1,008 curated Download sample CSV
Sample Organ Disease state Technique Cells Spatial module Curation
BRCA_31959985__IMC__BaselTMA_SP42_99_X5Y7__gate189 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,923 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_0_X10Y7__gate275 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,789 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_0_X1Y1__gate370 BRCA_31959985 · IMC / Imaging Mass Cytometry Liver Healthy/control IMC 2,510 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_0_X2Y1__gate371 BRCA_31959985 · IMC / Imaging Mass Cytometry Liver Healthy/control IMC 4,433 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_102_X1Y4__gate362 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 5,151 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_102_X2Y4__gate363 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 461 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_103_X5Y4__gate321 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 4,175 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_103_X6Y4__gate322 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 179 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_107_X4Y7__gate350 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,831 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_108_X13Y8__gate376 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 6,320 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_110_X14Y8__gate377 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,126 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_111_X8Y6__gate285 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 5,057 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_115_X4Y8__gate334 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 4,931 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_116_X14Y4__gate264 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 862 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_116_X3Y4__gate364 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 6,069 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_116_X4Y4__gate365 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 2,910 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_118_X13Y5__gate268 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 3,309 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_119_X9Y8__gate280 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,583 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_122_X12Y8__gate283 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 3,415 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_124_X10Y8__gate281 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 265 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_125_X5Y7__gate351 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,934 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_128_X16Y7__gate375 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 5,104 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_131_X13Y4__gate265 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,633 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_132_X13Y1__gate253 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 4,258 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_132_X14Y1__gate252 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 820 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_137_X10Y3__gate296 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 282 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_137_X9Y3__gate297 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 4,305 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_139_X1Y7__gate348 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,171 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_142_X5Y1__gate319 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,453 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_142_X6Y1__gate320 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 489 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_143_X1Y2__gate352 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 109 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_143_X2Y2__gate353 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 969 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_144_X15Y1__gate254 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 6,267 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_144_X16Y1__gate255 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 1,678 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_147_X6Y6__gate347 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 322 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_149_X10Y6__gate287 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 544 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_149_X10Y6__gate288 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 468 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_150_X5Y3__gate315 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,342 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_150_X6Y3__gate316 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 206 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_157_X4Y5__gate369 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 688 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_15_X1Y9__gate337 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 4,396 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_168_X10Y5__gate305 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 6,908 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_170_X3Y3__gate360 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,024 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_170_X4Y3__gate361 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 589 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_172_X10Y2__gate293 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 204 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_172_X9Y2__gate292 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 3,053 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_173_X2Y8__gate332 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 5,802 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_17_X11Y4__gate302 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 4,059 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_17_X12Y4__gate303 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 521 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_180_X5Y2__gate311 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,619 T1T2T3T1T2T3T1T2T3 Curated