scAtria single-cell spatial atlas resource

Browse

View by ?Dataset view shows one row per deployed dataset. Sample view shows one row per sample and is better for organ, disease, and spatial availability checks.
Dataset Sample
View mode ?Cards are for quick scanning. Tables are denser and better for comparison, sorting, and column customization.
Card Table
Search ?Search is user-initiated: type one keyword or several comma-separated keywords, then click Search keyword. Commas search alternatives, for example breast cancer, HNSCC, Xenium.
Filter scope 7,721 matches · sample view
Customized columns 7
Sample table columns Selections persist in the URL and manifest download.
Reset columns
All records 7,721 matches 7,508 curated Download sample CSV
MERFISH / MERSCOPE Spatial transcriptomics

GSM5910308_Panel3_CW20053A-2_ii

Sample ID: ASD_42288509__MERFISH__GSM5910308_Panel3_CW20053A-2_ii

Dataset: ASD_42288509 · MERFISH / MERSCOPE

Organ: Brain

Disease detail: Autism spectrum disorder cortical organoid model

Disease state: Non-cancer disease

Cells
16,419
Curation
Source
Spatial
Open dataset Spatial outputs not yet published for this sample.
MERFISH / MERSCOPE Spatial transcriptomics

GSM5910309_Panel3_CW20053A-2_ii

Sample ID: ASD_42288509__MERFISH__GSM5910309_Panel3_CW20053A-2_ii

Dataset: ASD_42288509 · MERFISH / MERSCOPE

Organ: Brain

Disease detail: Autism spectrum disorder cortical organoid model

Disease state: Non-cancer disease

Cells
14,805
Curation
Source
Spatial
Open dataset Spatial outputs not yet published for this sample.
MERFISH / MERSCOPE Spatial transcriptomics

GSM5910310_Panel3_CW60219E-4_i

Sample ID: ASD_42288509__MERFISH__GSM5910310_Panel3_CW60219E-4_i

Dataset: ASD_42288509 · MERFISH / MERSCOPE

Organ: Brain

Disease detail: Autism spectrum disorder cortical organoid model

Disease state: Non-cancer disease

Cells
31,932
Curation
Source
Spatial
Open dataset Spatial outputs not yet published for this sample.
MERFISH / MERSCOPE Spatial transcriptomics

GSM5910311_Panel3_CW60220F-4_i

Sample ID: ASD_42288509__MERFISH__GSM5910311_Panel3_CW60220F-4_i

Dataset: ASD_42288509 · MERFISH / MERSCOPE

Organ: Brain

Disease detail: Autism spectrum disorder cortical organoid model

Disease state: Non-cancer disease

Cells
19,819
Curation
Source
Spatial
Open dataset Spatial outputs not yet published for this sample.
MERFISH / MERSCOPE Spatial transcriptomics

GSM5910312_Panel3_CW20047D-3_i

Sample ID: ASD_42288509__MERFISH__GSM5910312_Panel3_CW20047D-3_i

Dataset: ASD_42288509 · MERFISH / MERSCOPE

Organ: Brain

Disease detail: Autism spectrum disorder cortical organoid model

Disease state: Non-cancer disease

Cells
18,343
Curation
Source
Spatial
Open dataset Spatial outputs not yet published for this sample.
MERFISH / MERSCOPE Spatial transcriptomics

GSM5910313_Panel3_CW60040F-4_i

Sample ID: ASD_42288509__MERFISH__GSM5910313_Panel3_CW60040F-4_i

Dataset: ASD_42288509 · MERFISH / MERSCOPE

Organ: Brain

Disease detail: Autism spectrum disorder cortical organoid model

Disease state: Non-cancer disease

Cells
33,896
Curation
Source
Spatial
Open dataset Spatial outputs not yet published for this sample.
MERFISH / MERSCOPE Spatial transcriptomics

GSM5910314_Panel4_CW60040F-5_i

Sample ID: ASD_42288509__MERFISH__GSM5910314_Panel4_CW60040F-5_i

Dataset: ASD_42288509 · MERFISH / MERSCOPE

Organ: Brain

Disease detail: Autism spectrum disorder cortical organoid model

Disease state: Non-cancer disease

Cells
5,132
Curation
Source
Spatial
Open dataset Spatial outputs not yet published for this sample.
MERFISH / MERSCOPE Spatial transcriptomics

GSM5910315_Panel4_CW20012E-2_i

Sample ID: ASD_42288509__MERFISH__GSM5910315_Panel4_CW20012E-2_i

Dataset: ASD_42288509 · MERFISH / MERSCOPE

Organ: Brain

Disease detail: Autism spectrum disorder cortical organoid model

Disease state: Non-cancer disease

Cells
4,893
Curation
Source
Spatial
Open dataset Spatial outputs not yet published for this sample.
MERFISH / MERSCOPE Spatial transcriptomics

GSM5910316_Panel4_CW60220F-3_i

Sample ID: ASD_42288509__MERFISH__GSM5910316_Panel4_CW60220F-3_i

Dataset: ASD_42288509 · MERFISH / MERSCOPE

Organ: Brain

Disease detail: Autism spectrum disorder cortical organoid model

Disease state: Non-cancer disease

Cells
10,538
Curation
Source
Spatial
Open dataset Spatial outputs not yet published for this sample.
MERFISH / MERSCOPE Spatial transcriptomics

GSM5910317_Panel4_CW20012E-2_ii

Sample ID: ASD_42288509__MERFISH__GSM5910317_Panel4_CW20012E-2_ii

Dataset: ASD_42288509 · MERFISH / MERSCOPE

Organ: Brain

Disease detail: Autism spectrum disorder cortical organoid model

Disease state: Non-cancer disease

Cells
14,849
Curation
Source
Spatial
Open dataset Spatial outputs not yet published for this sample.
MERFISH / MERSCOPE Spatial transcriptomics

GSM5910318_Panel4_CW60230E-4_i

Sample ID: ASD_42288509__MERFISH__GSM5910318_Panel4_CW60230E-4_i

Dataset: ASD_42288509 · MERFISH / MERSCOPE

Organ: Brain

Disease detail: Autism spectrum disorder cortical organoid model

Disease state: Non-cancer disease

Cells
22,415
Curation
Source
Spatial
Open dataset Spatial outputs not yet published for this sample.
MERFISH / MERSCOPE Spatial transcriptomics

GSM5910319_Panel4_CW20041A-2_i

Sample ID: ASD_42288509__MERFISH__GSM5910319_Panel4_CW20041A-2_i

Dataset: ASD_42288509 · MERFISH / MERSCOPE

Organ: Brain

Disease detail: Autism spectrum disorder cortical organoid model

Disease state: Non-cancer disease

Cells
9,998
Curation
Source
Spatial
Open dataset Spatial outputs not yet published for this sample.