scAtria single-cell spatial atlas resource

Browse

? Browse is the search page: type a query, then refine by organ, technique, modality, curation, and dataset/sample view.
Dataset Sample
Card Table
7,709 Samples
Search
Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
Filter scope 7,709 matches · sample view
Columns 7
Sample table columns Selections persist in the URL and manifest download.
Reset columns
All records 7,709 matches 7,487 curated Download sample CSV
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F008

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
1,033
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F009

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
2,573
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F010

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
1,685
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F011

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
611
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F012

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
403
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F013

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
2,148
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F014

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (remission)

Disease state: Non-cancer disease

Cells
1,027
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F017

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (remission)

Disease state: Non-cancer disease

Cells
426
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F018

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (remission)

Disease state: Non-cancer disease

Cells
539
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F021

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (remission)

Disease state: Non-cancer disease

Cells
934
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F022

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (remission)

Disease state: Non-cancer disease

Cells
317
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5654_399G0_32G77_F023

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (remission)

Disease state: Non-cancer disease

Cells
426
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.