scAtria single-cell spatial atlas resource

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Dataset Sample
Card Table
7,709 Samples
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Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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All records 7,709 matches 7,487 curated Download sample CSV
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5666_G7G72_G22G5_F022

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
3,522
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5666_G7G72_G22G5_F023

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
5,173
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5666_G7G72_G22G5_F024

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
4,061
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5666_G7G72_G22G5_F025

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
3,033
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

RheumatoidArthritis_39609125__CosMx_SMI__Run5666_G7G72_G22G5_F026

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
5,328
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.