scAtria single-cell spatial atlas resource

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View by ?Dataset view shows one row per deployed dataset. Sample view shows one row per sample and is better for organ, disease, and spatial availability checks.
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Search ?Search is user-initiated: type one keyword or several comma-separated keywords, then click Search keyword. Commas search alternatives, for example breast cancer, HNSCC, Xenium.
Filter scope 7,721 matches · sample view
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All records 7,721 matches 7,508 curated Download sample CSV
CosMx SMI / NanoString SMI Spatial transcriptomics

G7G72_1

Sample ID: RheumatoidArthritis_39609125__CosMx_SMI__G7G72_1

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
11,906
Curation
Source
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

G7G72_2

Sample ID: RheumatoidArthritis_39609125__CosMx_SMI__G7G72_2

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
9,106
Curation
Source
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

G7G72_3

Sample ID: RheumatoidArthritis_39609125__CosMx_SMI__G7G72_3

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
8,559
Curation
Source
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

G7G72_4

Sample ID: RheumatoidArthritis_39609125__CosMx_SMI__G7G72_4

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
4,525
Curation
Source
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

G7G72_5

Sample ID: RheumatoidArthritis_39609125__CosMx_SMI__G7G72_5

Dataset: RheumatoidArthritis_39609125 · CosMx SMI / NanoString SMI

Organ: Musculoskeletal

Disease detail: Rheumatoid arthritis (active)

Disease state: Non-cancer disease

Cells
24,368
Curation
Source
Spatial
Open dataset Spatial outputs not yet published for this sample.