scAtria single-cell spatial atlas resource

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1,008 Samples
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Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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Search: BRCA_35063072 × 1,008 matches 1,008 curated Download sample CSV
Sample Organ Disease state Technique Cells Spatial module Curation
BRCA_31959985__IMC__BaselTMA_SP43_180_X6Y2__gate312 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 108 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_193_X9Y7__gate274 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 3,659 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_194_X11Y7__gate276 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 933 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_195_X11Y6__gate289 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,217 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_197_X4Y9__gate339 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 825 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_199_X8Y5__gate329 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,943 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_19_X15Y2__gate258 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 3,520 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_19_X16Y2__gate259 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 276 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_1_X1Y8__gate331 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,907 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_200_X9Y6__gate286 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,332 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_201_X14Y5__gate269 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,948 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_202_X9Y5__gate304 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,976 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_205_X3Y6__gate344 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,298 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_207_X1Y6__gate342 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 3,131 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_209_X11Y1__gate310 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,962 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_209_X12Y1__gate291 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 285 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_213_X7Y7__gate272 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,638 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_21_X3Y5__gate368 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,743 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_221_X2Y7__gate349 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,280 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_222_X7Y2__gate313 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 3,193 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_222_X8Y2__gate314 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 107 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_225_X2Y9__gate338 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,904 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_226_X6Y9__gate341 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 5,282 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_22_X12Y6__gate290 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 3,123 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_230_X11Y5__gate306 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,440 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_233_X13Y7__gate372 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,139 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_235_X11Y2__gate294 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 3,477 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_235_X12Y2__gate295 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 1,968 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_23_X15Y7__gate374 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,607 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_241_X7Y3__gate317 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 3,041 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_241_X8Y3__gate318 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 51 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_242_X5Y6__gate346 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 3,063 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_243_X13Y3__gate260 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,947 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_243_X14Y3__gate261 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 780 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_244_X3Y1__gate356 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,939 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_244_X4Y1__gate357 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 108 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_245_X6Y5__gate327 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 4,628 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_246_X2Y6__gate343 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,738 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_248_X8Y8__gate279 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 798 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_250_X1Y3__gate358 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,457 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_250_X2Y3__gate359 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 2,061 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_252_X6Y7__gate330 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,647 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_260_X10Y4__gate300 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,829 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_260_X9Y4__gate301 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Healthy/control IMC 2,590 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_266_X7Y8__gate278 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 3,860 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_269_X5Y9__gate340 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 3,942 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_26_X16Y5__gate271 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 1,592 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_270_X3Y8__gate335 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,080 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_270_X6Y8__gate336 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 4,303 T1T2T3T1T2T3T1T2T3 Curated
BRCA_31959985__IMC__BaselTMA_SP43_271_X11Y8__gate282 BRCA_31959985 · IMC / Imaging Mass Cytometry Breast Primary cancer IMC 2,256 T1T2T3T1T2T3T1T2T3 Curated