scAtria single-cell spatial atlas resource

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Dataset Sample
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9 Samples
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Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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Search: CosMxWTx_Bruker × 9 matches 9 curated Download sample CSV
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

CosMxWTx_Bruker__CosMx_SMI__CosMxBreastCancerMultiWTx_Bruker

Dataset: Bruker CosMx WTx FFPE showcase

Organ: Breast

Disease detail: Breast cancer

Disease state: Primary cancer

Cells
152,451
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

CosMxWTx_Bruker__CosMx_SMI__CosMxBreastCancerWTx_Bruker

Dataset: Bruker CosMx WTx FFPE showcase

Organ: Breast

Disease detail: Breast cancer

Disease state: Primary cancer

Cells
645,251
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

CosMxWTx_Bruker__CosMx_SMI__CosMxColonCancerWTx_Bruker

Dataset: Bruker CosMx WTx FFPE showcase

Organ: Large intestine

Disease detail: Colorectal cancer

Disease state: Primary cancer

Cells
493,834
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

CosMxWTx_Bruker__CosMx_SMI__CosMxHippocampusWTx_Bruker

Dataset: Bruker CosMx WTx FFPE showcase

Organ: Brain

Disease detail: Normal/healthy hippocampus brain tissue

Disease state: Healthy/control

Cells
131,568
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

CosMxWTx_Bruker__CosMx_SMI__CosMxKidneyCancerWTx_Bruker

Dataset: Bruker CosMx WTx FFPE showcase

Organ: Kidney

Disease detail: Kidney cancer

Disease state: Primary cancer

Cells
436,787
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

CosMxWTx_Bruker__CosMx_SMI__CosMxPancreasSmallWTxDown_Bruker

Dataset: Bruker CosMx WTx FFPE showcase

Organ: Pancreas

Disease detail: Normal/healthy pancreas control

Disease state: Healthy/control

Cells
25,304
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

CosMxWTx_Bruker__CosMx_SMI__CosMxPancreasSmallWTxUp_Bruker

Dataset: Bruker CosMx WTx FFPE showcase

Organ: Pancreas

Disease detail: Normal/healthy pancreas control

Disease state: Healthy/control

Cells
23,640
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

CosMxWTx_Bruker__CosMx_SMI__CosMxPancreasWTx_Bruker

Dataset: Bruker CosMx WTx FFPE showcase

Organ: Pancreas

Disease detail: Normal/healthy pancreas control

Disease state: Healthy/control

Cells
413,373
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics Curated

CosMxWTx_Bruker__CosMx_SMI__CosMxSkinCancerWTx_Bruker

Dataset: Bruker CosMx WTx FFPE showcase

Organ: Skin

Disease detail: Skin cancer

Disease state: Primary cancer

Cells
555,820
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.