scAtria single-cell spatial atlas resource

Browse

? Browse is the search page: type a query, then refine by organ, technique, modality, curation, and dataset/sample view.
Dataset Sample
Card Table
3 Datasets
SearchFiltered
Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
Filter scope 3 matches · dataset view
Reset
Columns 8
Dataset table columns Selections persist in the URL and manifest download.
Reset columns
Search: HGSC_39179931 × 3 matches 3 curated
Dataset Organs ?For mixed datasets, fractions show sample counts per organ. Disease state Technique Samples Cells Spatial module Curation
HGSC_39179931 · CosMx SMI / NanoString SMI
HGSC_39179931__CosMx_SMI
Ovary 166
Primary cancer 166
CosMx 166 1,724,825
165/166
 Curated
HGSC_39179931 · MERFISH / MERSCOPE
HGSC_39179931__MERFISH
Ovary 4
Primary cancer 4
MERFISH 4 425,578
4/4
 Curated
HGSC_39179931 · Xenium
HGSC_39179931__Xenium
Ovary 32
Primary cancer 32
Xenium 32 447,874
32/32
 Curated