scAtria single-cell spatial atlas resource

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Dataset Sample
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594 Samples
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Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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Search: HNSCCHealthyLN_41616773 × 594 matches 572 curated Download sample CSV
Visium HD Spatial transcriptomics Curated

VisiumHD_p2_WholeSlide__Visium_HD__Visium_HD_6p5mm_Human_Heart

Dataset: 10x Genomics Visium HD p2 WholeSlide showcase

Organ: Heart

Disease detail: Normal/healthy heart control

Disease state: Healthy/control

Cells
45,616
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Visium HD Spatial transcriptomics Curated

Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Kidney_FFPE

Dataset: 10x Genomics Visium HD showcase

Organ: Kidney

Disease detail: Healthy human

Disease state: Healthy/control

Cells
148,056
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Visium HD Spatial transcriptomics Curated

Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Lymph_Node_FFPE

Dataset: 10x Genomics Visium HD showcase

Organ: Lymphoid tissue

Disease detail: Healthy human

Disease state: Healthy/control

Cells
300,211
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Visium HD Spatial transcriptomics Curated

Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Pancreas

Dataset: 10x Genomics Visium HD showcase

Organ: Pancreas

Disease detail: Healthy human

Disease state: Healthy/control

Cells
50,897
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Visium HD Spatial transcriptomics Curated

Visium_HD_10xGenomics__Visium_HD__Visium_HD_Human_Tonsil_Fresh_Frozen

Dataset: 10x Genomics Visium HD showcase

Organ: Lymphoid tissue

Disease detail: Reactive Follicular Hyperplasia

Disease state: Healthy/control

Cells
959,759
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.