scAtria single-cell spatial atlas resource

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18 Samples
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Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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Search: Intestine_39843748 × 18 matches 18 curated Download sample CSV
MERFISH / MERSCOPE Spatial transcriptomics Curated

Intestine_39843748__MERFISH__GSE280895_tgfb__KO

Dataset: Intestine_39843748 · MERFISH / MERSCOPE

Organ: Small intestine

Disease detail: Healthy intestine

Disease state: Healthy/control

Cells
234,586
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
MERFISH / MERSCOPE Spatial transcriptomics Curated

Intestine_39843748__MERFISH__GSE280895_tgfb__WT

Dataset: Intestine_39843748 · MERFISH / MERSCOPE

Organ: Small intestine

Disease detail: Healthy intestine

Disease state: Healthy/control

Cells
235,495
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Xenium Spatial transcriptomics Curated

Intestine_39843748__Xenium__GSE280895_human__human_05_r1

Dataset: Intestine_39843748 · Xenium

Organ: Small intestine

Disease detail: Healthy intestine

Disease state: Healthy/control

Cells
59,128
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Xenium Spatial transcriptomics Curated

Intestine_39843748__Xenium__GSE280895_human__human_05_r2

Dataset: Intestine_39843748 · Xenium

Organ: Small intestine

Disease detail: Healthy intestine

Disease state: Healthy/control

Cells
61,896
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Xenium Spatial transcriptomics Curated

Intestine_39843748__Xenium__GSE280895_human__human_09_r1

Dataset: Intestine_39843748 · Xenium

Organ: Small intestine

Disease detail: Healthy intestine

Disease state: Healthy/control

Cells
44,654
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Xenium Spatial transcriptomics Curated

Intestine_39843748__Xenium__GSE280895_human__human_09_r2

Dataset: Intestine_39843748 · Xenium

Organ: Small intestine

Disease detail: Healthy intestine

Disease state: Healthy/control

Cells
48,868
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Xenium Spatial transcriptomics Curated

Intestine_39843748__Xenium__GSE280895_perturb__SI_2

Dataset: Intestine_39843748 · Xenium

Organ: Small intestine

Disease detail: Healthy intestine

Disease state: Healthy/control

Cells
239,393
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Xenium Spatial transcriptomics Curated

Intestine_39843748__Xenium__GSE280895_perturb__SI_3

Dataset: Intestine_39843748 · Xenium

Organ: Small intestine

Disease detail: Healthy intestine

Disease state: Healthy/control

Cells
157,481
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Xenium Spatial transcriptomics Curated

Intestine_39843748__Xenium__GSE280895_timecourse__day30_SI

Dataset: Intestine_39843748 · Xenium

Organ: Small intestine

Disease detail: Healthy intestine

Disease state: Healthy/control

Cells
251,218
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Xenium Spatial transcriptomics Curated

Intestine_39843748__Xenium__GSE280895_timecourse__day30_SI_r2

Dataset: Intestine_39843748 · Xenium

Organ: Small intestine

Disease detail: Healthy intestine

Disease state: Healthy/control

Cells
258,269
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Xenium Spatial transcriptomics Curated

Intestine_39843748__Xenium__GSE280895_timecourse__day6_SI

Dataset: Intestine_39843748 · Xenium

Organ: Small intestine

Disease detail: Healthy intestine

Disease state: Healthy/control

Cells
322,464
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Xenium Spatial transcriptomics Curated

Intestine_39843748__Xenium__GSE280895_timecourse__day6_SI_r2

Dataset: Intestine_39843748 · Xenium

Organ: Small intestine

Disease detail: Healthy intestine

Disease state: Healthy/control

Cells
274,464
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.