scAtria single-cell spatial atlas resource

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View by ?Dataset view shows one row per deployed dataset. Sample view shows one row per sample and is better for organ, disease, and spatial availability checks.
Dataset Sample
View mode ?Cards are for quick scanning. Tables are denser and better for comparison, sorting, and column customization.
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2 Samples
SearchFiltered ?Search uses keyword matching across catalog text fields. A matching record may contain the term in metadata such as dataset keys, titles, studies, organs, diseases, techniques, or identifiers, not only in the currently visible field.
Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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Customized columns 7
Sample table columns Selections persist in the URL and manifest download.
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Search: Liver_41986723 × 2 matches 0 curated Download sample CSV
MERFISH / MERSCOPE Spatial transcriptomics

Liver_41986723__MERFISH__M5

Dataset: Liver_41986723 · MERFISH / MERSCOPE

Organ: Liver

Disease detail: normal/healthy liver control

Disease state: Healthy/control

Cells
102,914
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
MERFISH / MERSCOPE Spatial transcriptomics

Liver_41986723__MERFISH__M8

Dataset: Liver_41986723 · MERFISH / MERSCOPE

Organ: Liver

Disease detail: normal/healthy liver control

Disease state: Healthy/control

Cells
207,498
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.