scAtria single-cell spatial atlas resource

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3 Samples
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Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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Search: MERFISH_960_Vizgen × 3 matches 3 curated Download sample CSV
MERFISH / MERSCOPE Spatial transcriptomics Curated

MERFISH_960_Vizgen__MERFISH__MERFISH960HuBrainS3_R1

Dataset: MERFISH 960-plex Vizgen showcase

Organ: Brain

Disease detail: Normal (Human Cortical Samples)

Disease state: Healthy/control

Cells
69,931
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
MERFISH / MERSCOPE Spatial transcriptomics Curated

MERFISH_960_Vizgen__MERFISH__MERFISH960HuBrainS3_R2

Dataset: MERFISH 960-plex Vizgen showcase

Organ: Brain

Disease detail: Alzheimer's Disease (Human Cortical Samples)

Disease state: Non-cancer disease

Cells
186,623
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
MERFISH / MERSCOPE Spatial transcriptomics Curated

MERFISH_960_Vizgen__MERFISH__MERFISH960HuBrainSF_R0

Dataset: MERFISH 960-plex Vizgen showcase

Organ: Brain

Disease detail: Alzheimer's Disease

Disease state: Non-cancer disease

Cells
137,627
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.