scAtria single-cell spatial atlas resource

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View by ?Dataset view shows one row per deployed dataset. Sample view shows one row per sample and is better for organ, disease, and spatial availability checks.
Dataset Sample
View mode ?Cards are for quick scanning. Tables are denser and better for comparison, sorting, and column customization.
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6 Samples
SearchFiltered ?Search uses keyword matching across catalog text fields. A matching record may contain the term in metadata such as dataset keys, titles, studies, organs, diseases, techniques, or identifiers, not only in the currently visible field.
Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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Search: NSCLC_40220761 × 6 matches 0 curated Download sample CSV
CosMx SMI / NanoString SMI Spatial transcriptomics

NSCLC_40220761__CosMx_SMI__Section_04

Dataset: NSCLC_40220761 · CosMx SMI / NanoString SMI

Organ: Lung

Disease detail: Non-small cell lung cancer

Disease state: Primary cancer

Cells
58,805
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

NSCLC_40220761__CosMx_SMI__Section_10

Dataset: NSCLC_40220761 · CosMx SMI / NanoString SMI

Organ: Lung

Disease detail: Non-small cell lung cancer

Disease state: Primary cancer

Cells
58,228
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

NSCLC_40220761__CosMx_SMI__Section_16

Dataset: NSCLC_40220761 · CosMx SMI / NanoString SMI

Organ: Lung

Disease detail: Non-small cell lung cancer

Disease state: Primary cancer

Cells
57,435
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

NSCLC_40220761__CosMx_SMI__Section_22

Dataset: NSCLC_40220761 · CosMx SMI / NanoString SMI

Organ: Lung

Disease detail: Non-small cell lung cancer

Disease state: Primary cancer

Cells
59,208
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

NSCLC_40220761__CosMx_SMI__Section_28

Dataset: NSCLC_40220761 · CosMx SMI / NanoString SMI

Organ: Lung

Disease detail: Non-small cell lung cancer

Disease state: Primary cancer

Cells
59,564
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
CosMx SMI / NanoString SMI Spatial transcriptomics

NSCLC_40220761__CosMx_SMI__Section_34

Dataset: NSCLC_40220761 · CosMx SMI / NanoString SMI

Organ: Lung

Disease detail: Non-small cell lung cancer

Disease state: Primary cancer

Cells
56,959
Curation
Source
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.