scAtria single-cell spatial atlas resource

Browse

? Browse is the search page: type a query, then refine by organ, technique, modality, curation, and dataset/sample view.
Dataset Sample
Card Table
66 Samples
SearchFiltered
Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
Filter scope 66 matches · sample view
Reset
Columns 7
Sample table columns Selections persist in the URL and manifest download.
Reset columns
Search: Visium_HD_10xGenomics × 66 matches 66 curated Download sample CSV
Visium HD Spatial transcriptomics Curated

VisiumHD_p2_TissueArray__Visium_HD__Visium_HD_11mm_Human_TA_Breast_Cancer

Dataset: 10x Genomics Visium HD p2 TissueArray showcase

Organ: Breast

Disease detail: Breast cancer (invasive ductal carcinoma)

Disease state: Primary cancer

Cells
158,058
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Visium HD Spatial transcriptomics Curated

VisiumHD_p2_TissueArray__Visium_HD__Visium_HD_11mm_Human_TA_Colon_Cancer

Dataset: 10x Genomics Visium HD p2 TissueArray showcase

Organ: Large intestine

Disease detail: Colorectal cancer (adenocarcinoma)

Disease state: Primary cancer

Cells
234,929
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Visium HD Spatial transcriptomics Curated

VisiumHD_p2_TissueArray__Visium_HD__Visium_HD_11mm_Human_TA_Lung_Cancer

Dataset: 10x Genomics Visium HD p2 TissueArray showcase

Organ: Lung

Disease detail: Non-small cell lung cancer

Disease state: Primary cancer

Cells
113,248
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.