scAtria single-cell spatial atlas resource

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Dataset Sample
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19 Samples
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Examples Study ID HNSCC_41616773 Modality Spatial transcriptomics Technique Xenium Organ breast Disease state primary cancer Disease detail breast cancer
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Search: XeniumBreast_10xGenomics × 19 matches 19 curated Download sample CSV
Xenium Spatial transcriptomics Curated

Xenium5k_10xGenomics__Xenium__Xenium_Prime_Breast_Cancer_FFPE

Dataset: 10x Genomics Xenium Prime 5K showcase

Organ: Breast

Disease detail: Breast cancer

Disease state: Primary cancer

Cells
699,110
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Xenium Spatial transcriptomics Curated

XeniumBreast_10xGenomics__Xenium__Xenium_V1_FFPE_Human_Breast_IDC

Dataset: Xenium Human Breast Gene Expression Panel 10x Genomics showcase

Organ: Breast

Disease detail: Breast cancer (invasive ductal carcinoma, ductal carcinoma in situ)

Disease state: Primary cancer

Cells
574,852
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Xenium Spatial transcriptomics Curated

XeniumBreast_10xGenomics__Xenium__Xenium_V1_FFPE_Human_Breast_IDC_Big_1

Dataset: Xenium Human Breast Gene Expression Panel 10x Genomics showcase

Organ: Breast

Disease detail: Breast cancer (invasive ductal carcinoma)

Disease state: Primary cancer

Cells
892,966
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Xenium Spatial transcriptomics Curated

XeniumBreast_10xGenomics__Xenium__Xenium_V1_FFPE_Human_Breast_IDC_Big_2

Dataset: Xenium Human Breast Gene Expression Panel 10x Genomics showcase

Organ: Breast

Disease detail: Breast cancer (invasive ductal carcinoma)

Disease state: Primary cancer

Cells
885,523
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Xenium Spatial transcriptomics Curated

XeniumBreast_10xGenomics__Xenium__Xenium_V1_FFPE_Human_Breast_IDC_With_Addon

Dataset: Xenium Human Breast Gene Expression Panel 10x Genomics showcase

Organ: Breast

Disease detail: Breast cancer (invasive ductal carcinoma, ductal carcinoma in situ)

Disease state: Primary cancer

Cells
576,963
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Xenium Spatial transcriptomics Curated

XeniumBreast_10xGenomics__Xenium__Xenium_V1_FFPE_Human_Breast_ILC

Dataset: Xenium Human Breast Gene Expression Panel 10x Genomics showcase

Organ: Breast

Disease detail: Breast cancer (invasive lobular carcinoma)

Disease state: Primary cancer

Cells
356,746
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Xenium Spatial transcriptomics Curated

XeniumBreast_10xGenomics__Xenium__Xenium_V1_FFPE_Human_Breast_ILC_With_Addon

Dataset: Xenium Human Breast Gene Expression Panel 10x Genomics showcase

Organ: Breast

Disease detail: Breast cancer (invasive lobular carcinoma)

Disease state: Primary cancer

Cells
365,604
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.
Xenium Spatial transcriptomics Curated

XeniumBreastJanesick_10xGenomics__Xenium__Human_Breast_Biomarkers_S1_Mid

Dataset: Xenium Human Breast Gene Expression Panel bioRxiv biomarker showcase

Organ: Breast

Disease detail: Breast cancer (DCIS, ER+/PR+/HER2-2+)

Disease state: Primary cancer

Cells
375,529
Curation
Curated
DEG
NA
Spatial
Open dataset Spatial outputs not yet published for this sample.