scAtria single-cell spatial atlas resource

BRCA_31959985 · IMC / Imaging Mass Cytometry

BRCA_31959985 · BRCA_31959985__IMC

IMC / Imaging Mass Cytometry Spatial proteomics Curated Tiered PMID 31959985 DOI 10.1038/s41586-019-1876-x
Samples

Sample manifest

251-300 of 381
Sample Organ ?When a dataset spans multiple organs, the fraction shows how many samples map to each organ. Disease state Disease detail Cells Curation Spatial modules
BRCA_31959985__IMC__BaselTMA_SP42_99_X5Y7__gate189 Breast Primary cancer Breast cancer 1,923 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_0_X10Y7__gate275 Breast Primary cancer Breast cancer 1,789 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_0_X1Y1__gate370 Liver Healthy/control Normal/healthy liver control 2,510 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_0_X2Y1__gate371 Liver Healthy/control Normal/healthy liver control 4,433 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_102_X1Y4__gate362 Breast Primary cancer Breast cancer 5,151 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_102_X2Y4__gate363 Breast Healthy/control Normal/healthy breast tissue control 461 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_103_X5Y4__gate321 Breast Primary cancer Breast cancer 4,175 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_103_X6Y4__gate322 Breast Healthy/control Normal/healthy breast tissue control 179 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_107_X4Y7__gate350 Breast Primary cancer Breast cancer 2,831 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_108_X13Y8__gate376 Breast Primary cancer Breast cancer 6,320 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_110_X14Y8__gate377 Breast Primary cancer Breast cancer 1,126 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_111_X8Y6__gate285 Breast Primary cancer Breast cancer 5,057 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_115_X4Y8__gate334 Breast Primary cancer Breast cancer 4,931 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_116_X14Y4__gate264 Breast Healthy/control Normal/healthy breast tissue control 862 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_116_X3Y4__gate364 Breast Primary cancer Breast cancer 6,069 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_116_X4Y4__gate365 Breast Healthy/control Normal/healthy breast tissue control 2,910 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_118_X13Y5__gate268 Breast Primary cancer Breast cancer 3,309 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_119_X9Y8__gate280 Breast Primary cancer Breast cancer 1,583 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_122_X12Y8__gate283 Breast Primary cancer Breast cancer 3,415 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_124_X10Y8__gate281 Breast Primary cancer Breast cancer 265 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_125_X5Y7__gate351 Breast Primary cancer Breast cancer 1,934 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_128_X16Y7__gate375 Breast Primary cancer Breast cancer 5,104 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_131_X13Y4__gate265 Breast Primary cancer Breast cancer 1,633 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_132_X13Y1__gate253 Breast Primary cancer Breast cancer 4,258 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_132_X14Y1__gate252 Breast Healthy/control Normal/healthy breast tissue control 820 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_137_X10Y3__gate296 Breast Primary cancer Breast cancer 282 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_137_X9Y3__gate297 Breast Healthy/control Normal/healthy breast tissue control 4,305 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_139_X1Y7__gate348 Breast Primary cancer Breast cancer 2,171 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_142_X5Y1__gate319 Breast Primary cancer Breast cancer 2,453 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_142_X6Y1__gate320 Breast Healthy/control Normal/healthy breast tissue control 489 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_143_X1Y2__gate352 Breast Primary cancer Breast cancer 109 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_143_X2Y2__gate353 Breast Healthy/control Normal/healthy breast tissue control 969 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_144_X15Y1__gate254 Breast Primary cancer Breast cancer 6,267 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_144_X16Y1__gate255 Breast Healthy/control Normal/healthy breast tissue control 1,678 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_147_X6Y6__gate347 Breast Primary cancer Breast cancer 322 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_149_X10Y6__gate287 Breast Primary cancer Breast cancer 544 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_149_X10Y6__gate288 Breast Primary cancer Breast cancer 468 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_150_X5Y3__gate315 Breast Primary cancer Breast cancer 2,342 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_150_X6Y3__gate316 Breast Healthy/control Normal/healthy breast tissue control 206 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_157_X4Y5__gate369 Breast Primary cancer Breast cancer 688 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_15_X1Y9__gate337 Breast Primary cancer Breast cancer 4,396 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_168_X10Y5__gate305 Breast Primary cancer Breast cancer 6,908 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_170_X3Y3__gate360 Breast Primary cancer Breast cancer 2,024 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_170_X4Y3__gate361 Breast Healthy/control Normal/healthy breast tissue control 589 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_172_X10Y2__gate293 Breast Healthy/control Normal/healthy breast tissue control 204 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_172_X9Y2__gate292 Breast Primary cancer Breast cancer 3,053 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_173_X2Y8__gate332 Breast Primary cancer Breast cancer 5,802 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_17_X11Y4__gate302 Breast Primary cancer Breast cancer 4,059 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_17_X12Y4__gate303 Breast Healthy/control Normal/healthy breast tissue control 521 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_180_X5Y2__gate311 Breast Primary cancer Breast cancer 2,619 Curated Domains, Interaction, Topology