scAtria single-cell spatial atlas resource

BRCA_31959985 · IMC / Imaging Mass Cytometry

BRCA_31959985 · BRCA_31959985__IMC

IMC / Imaging Mass Cytometry Spatial proteomics Curated Tiered PMID 31959985 DOI 10.1038/s41586-019-1876-x
Samples

Sample manifest

351-381 of 381
Sample Organ ?When a dataset spans multiple organs, the fraction shows how many samples map to each organ. Disease state Disease detail Cells Curation Spatial modules
BRCA_31959985__IMC__BaselTMA_SP43_272_X11Y3__gate298 Breast Primary cancer Breast cancer 1,778 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_272_X12Y3__gate299 Breast Healthy/control Normal/healthy breast tissue control 673 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_278_X3Y2__gate354 Breast Primary cancer Breast cancer 3,430 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_278_X4Y2__gate355 Breast Healthy/control Normal/healthy breast tissue control 1,089 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_281_X8Y7__gate273 Breast Primary cancer Breast cancer 2,198 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_32_X4Y6__gate345 Breast Primary cancer Breast cancer 3,914 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_34_X12Y5__gate307 Breast Primary cancer Breast cancer 2,451 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_3_X13Y6__gate378 Breast Primary cancer Breast cancer 1,563 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_43_X5Y5__gate326 Breast Primary cancer Breast cancer 2,250 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_47_X16Y4__gate267 Breast Primary cancer Breast cancer 2,635 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_49_X1Y5__gate366 Breast Primary cancer Breast cancer 4,237 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_4_X15Y3__gate262 Breast Primary cancer Breast cancer 3,076 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_4_X16Y3__gate263 Breast Healthy/control Normal/healthy breast tissue control 148 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_50_X7Y1__gate325 Breast Primary cancer Breast cancer 2,902 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_50_X8Y1__gate328 Breast Healthy/control Normal/healthy breast tissue control 30 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_65_X14Y6__gate379 Breast Primary cancer Breast cancer 98 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_66_X15Y6__gate380 Breast Primary cancer Breast cancer 1,646 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_67_X14Y7__gate373 Breast Primary cancer Breast cancer 3,352 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_75_X2Y5__gate367 Breast Primary cancer Breast cancer 2,771 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_77_X3Y9__gate333 Breast Primary cancer Breast cancer 4,334 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_79_X7Y4__gate323 Breast Primary cancer Breast cancer 3,586 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_79_X8Y4__gate324 Breast Healthy/control Normal/healthy breast tissue control 4,083 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_85_X10Y1__gate309 Breast Healthy/control Normal/healthy breast tissue control 391 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_85_X9Y1__gate308 Breast Primary cancer Breast cancer 1,806 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_87_X15Y4__gate266 Breast Primary cancer Breast cancer 1,931 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_90_X7Y6__gate284 Breast Primary cancer Breast cancer 3,194 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_93_X15Y5__gate270 Breast Primary cancer Breast cancer 5,285 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_94_X12Y7__gate277 Breast Primary cancer Breast cancer 2,991 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_95_X13Y2__gate256 Breast Primary cancer Breast cancer 2,640 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_95_X14Y2__gate257 Breast Healthy/control Normal/healthy breast tissue control 384 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP43_97_X16Y6__gate381 Breast Primary cancer Breast cancer 3,648 Curated Domains, Interaction, Topology