scAtria single-cell spatial atlas resource

BRCA_31959985 · IMC / Imaging Mass Cytometry

BRCA_31959985 · BRCA_31959985__IMC

IMC / Imaging Mass Cytometry Spatial proteomics Curated Tiered PMID 31959985 DOI 10.1038/s41586-019-1876-x
Samples

Sample manifest

1-50 of 381
Sample Organ ?When a dataset spans multiple organs, the fraction shows how many samples map to each organ. Disease state Disease detail Cells Curation Spatial modules
BRCA_31959985__IMC__BaselTMA_SP41_0_X1Y1__gate106 Liver Healthy/control Normal/healthy liver control 184 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_0_X2Y1__gate107 Liver Healthy/control Normal/healthy liver control 1,914 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_100_X15Y5__gate014 Breast Primary cancer Breast cancer 3,558 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_101_X10Y8__gate055 Breast Primary cancer Breast cancer 3,433 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_104_X7Y4__gate064 Breast Primary cancer Breast cancer 490 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_104_X8Y4__gate069 Breast Healthy/control Normal/healthy breast tissue control 1,841 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_104_X8Y4__gate101 Breast Healthy/control Normal/healthy breast tissue control 2,046 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_106_X2Y9__gate123 Breast Primary cancer Breast cancer 2,423 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_112_X5Y8__gate118 Breast Primary cancer Breast cancer 2,927 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_114_X13Y4__gate005 Breast Primary cancer Breast cancer 2,706 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_114_X14Y4__gate010 Breast Healthy/control Normal/healthy breast tissue control 324 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_117_X13Y3__gate006 Breast Primary cancer Breast cancer 4,572 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_117_X14Y3__gate011 Breast Healthy/control Normal/healthy breast tissue control 223 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_11_X13Y7__gate031 Breast Primary cancer Breast cancer 4,565 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_126_X14Y7__gate034 Breast Primary cancer Breast cancer 2,892 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_129_X7Y8__gate046 Breast Primary cancer Breast cancer 1,751 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_133_X3Y6__gate114 Breast Primary cancer Breast cancer 4,151 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_134_X3Y8__gate112 Breast Primary cancer Breast cancer 2,211 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_135_X8Y5__gate068 Breast Primary cancer Breast cancer 3,376 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_141_X11Y2__gate026 Breast Primary cancer Breast cancer 5,662 Curated NA
BRCA_31959985__IMC__BaselTMA_SP41_141_X12Y2__gate002 Breast Healthy/control Normal/healthy breast tissue control 680 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_14_X1Y8__gate115 Breast Primary cancer Breast cancer 3,401 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_153_X7Y5__gate063 Breast Primary cancer Breast cancer 1,325 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_159_X11Y4__gate083 Breast Primary cancer Breast cancer 309 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_159_X12Y4__gate029 Breast Primary cancer Breast cancer 2,515 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_165_X5Y6__gate121 Breast Primary cancer Breast cancer 1,708 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_166_X15Y4__gate015 Breast Primary cancer Breast cancer 3,066 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_177_X16Y4__gate019 Breast Primary cancer Breast cancer 587 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_177_X16Y4__gate020 Breast Primary cancer Breast cancer 669 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_177_X16Y5__gate021 Breast Primary cancer Breast cancer 2,723 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_186_X5Y4__gate096 Breast Primary cancer Breast cancer 4,923 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_186_X6Y4__gate100 Breast Healthy/control Normal/healthy breast tissue control 1,965 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_187_X3Y2__gate091 Breast Healthy/control Normal/healthy breast tissue control 194 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_187_X4Y2__gate095 Breast Healthy/control Normal/healthy breast tissue control 62 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_18_X13Y5__gate004 Breast Primary cancer Breast cancer 1,851 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_191_X15Y7__gate036 Breast Primary cancer Breast cancer 4,544 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_196_X5Y7__gate119 Breast Primary cancer Breast cancer 1,392 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_203_X8Y8__gate049 Breast Primary cancer Breast cancer 2,771 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_206_X1Y2__gate105 Breast Primary cancer Breast cancer 3,389 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_206_X2Y2__gate088 Breast Healthy/control Normal/healthy breast tissue control 1,853 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_20_X12Y5__gate028 Breast Primary cancer Breast cancer 399 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_211_X4Y6__gate117 Breast Primary cancer Breast cancer 2,284 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_212_X1Y9__gate125 Breast Primary cancer Breast cancer 2,203 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_214_X15Y6__gate037 Breast Primary cancer Breast cancer 2,123 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_216_X1Y6__gate122 Breast Primary cancer Breast cancer 2,422 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_218_X10Y4__gate077 Breast Healthy/control Normal/healthy breast tissue control 2,554 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_218_X10Y4__gate104 Breast Healthy/control Normal/healthy breast tissue control 2,468 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_218_X9Y4__gate073 Breast Primary cancer Breast cancer 85 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_218_X9Y4__gate103 Breast Primary cancer Breast cancer 2,580 Curated Domains, Interaction, Topology
BRCA_31959985__IMC__BaselTMA_SP41_219_X8Y7__gate050 Breast Primary cancer Breast cancer 2,755 Curated Domains, Interaction, Topology