scAtria single-cell spatial atlas resource

CRC_41986711 · CosMx SMI / NanoString SMI

CRC_41986711 · CRC_41986711__CosMx_SMI

CosMx SMI / NanoString SMI Spatial transcriptomics Curated Tiered PMID 41986711 DOI 10.1038/s41586-026-10344-7
Samples

Sample manifest

1-50 of 352
Sample Organ ?When a dataset spans multiple organs, the fraction shows how many samples map to each organ. Disease state Disease detail Cells Curation Spatial modules
CRC_41986711__CosMx_SMI__FOV_1 Large intestine Primary cancer Colorectal cancer 59 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_10 Large intestine Primary cancer Colorectal cancer 459 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_100 Large intestine Primary cancer Colorectal cancer 712 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_101 Large intestine Primary cancer Colorectal cancer 942 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_102 Large intestine Primary cancer Colorectal cancer 1,196 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_103 Large intestine Primary cancer Colorectal cancer 1,415 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_104 Large intestine Primary cancer Colorectal cancer 2,059 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_105 Large intestine Primary cancer Colorectal cancer 2,445 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_106 Large intestine Primary cancer Colorectal cancer 2,595 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_107 Large intestine Primary cancer Colorectal cancer 3,326 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_108 Large intestine Primary cancer Colorectal cancer 3,165 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_109 Large intestine Primary cancer Colorectal cancer 3,496 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_11 Large intestine Primary cancer Colorectal cancer 271 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_110 Large intestine Primary cancer Colorectal cancer 3,462 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_111 Large intestine Primary cancer Colorectal cancer 3,579 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_112 Large intestine Primary cancer Colorectal cancer 3,274 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_113 Large intestine Primary cancer Colorectal cancer 2,318 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_114 Large intestine Primary cancer Colorectal cancer 181 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_115 Large intestine Primary cancer Colorectal cancer 1,377 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_116 Large intestine Primary cancer Colorectal cancer 1,550 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_117 Large intestine Primary cancer Colorectal cancer 2,194 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_118 Large intestine Primary cancer Colorectal cancer 2,396 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_119 Large intestine Primary cancer Colorectal cancer 2,347 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_12 Large intestine Primary cancer Colorectal cancer 1,368 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_120 Large intestine Primary cancer Colorectal cancer 2,525 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_121 Large intestine Primary cancer Colorectal cancer 3,005 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_122 Large intestine Primary cancer Colorectal cancer 3,430 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_123 Large intestine Primary cancer Colorectal cancer 3,207 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_124 Large intestine Primary cancer Colorectal cancer 2,960 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_125 Large intestine Primary cancer Colorectal cancer 2,896 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_126 Large intestine Primary cancer Colorectal cancer 2,890 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_127 Large intestine Primary cancer Colorectal cancer 900 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_128 Large intestine Primary cancer Colorectal cancer 45 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_129 Large intestine Primary cancer Colorectal cancer 1,040 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_13 Large intestine Primary cancer Colorectal cancer 692 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_130 Large intestine Primary cancer Colorectal cancer 1,884 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_131 Large intestine Primary cancer Colorectal cancer 2,470 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_132 Large intestine Primary cancer Colorectal cancer 2,573 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_133 Large intestine Primary cancer Colorectal cancer 2,455 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_134 Large intestine Primary cancer Colorectal cancer 2,263 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_135 Large intestine Primary cancer Colorectal cancer 2,154 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_136 Large intestine Primary cancer Colorectal cancer 2,475 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_137 Large intestine Primary cancer Colorectal cancer 2,811 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_138 Large intestine Primary cancer Colorectal cancer 2,040 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_139 Large intestine Primary cancer Colorectal cancer 57 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_14 Large intestine Primary cancer Colorectal cancer 765 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_140 Large intestine Primary cancer Colorectal cancer 969 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_141 Large intestine Primary cancer Colorectal cancer 1,189 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_142 Large intestine Primary cancer Colorectal cancer 2,333 Curated Domains, Interaction, Topology
CRC_41986711__CosMx_SMI__FOV_143 Large intestine Primary cancer Colorectal cancer 2,620 Curated Domains, Interaction, Topology