scAtria single-cell spatial atlas resource

CRC_41986711 · CosMx SMI / NanoString SMI

CRC_41986711 · CRC_41986711__CosMx_SMI

CosMx SMI / NanoString SMI Spatial transcriptomics Curated Tiered
Spatial analyses

Dataset sample manifest

Dataset-specific sample status for each public spatial analysis page.

151-200 of 352
Domains Interaction Topology Download sample CSV
Domains

Neighborhood-domain samples

350 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
CRC_41986711__CosMx_SMI__FOV_235 Large intestine 2,476 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_236 Large intestine 2,263 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_237 Large intestine 23 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_238 Large intestine 430 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_239 Large intestine 517 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_24 Large intestine 2,331 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_240 Large intestine 456 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_241 Large intestine 331 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_242 Large intestine 2,045 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_243 Large intestine 2,377 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_244 Large intestine 3,509 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_245 Large intestine 2,139 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_246 Large intestine 2,340 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_247 Large intestine 1,169 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_248 Large intestine 373 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_249 Large intestine 323 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_25 Large intestine 2,281 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_250 Large intestine 283 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_251 Large intestine 334 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_252 Large intestine 358 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_253 Large intestine 3,186 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_254 Large intestine 3,078 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_255 Large intestine 3,306 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_256 Large intestine 2,300 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_257 Large intestine 1,385 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_258 Large intestine 111 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_259 Large intestine 169 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_26 Large intestine 626 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_260 Large intestine 203 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_261 Large intestine 271 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_262 Large intestine 619 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_263 Large intestine 801 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_264 Large intestine 939 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_265 Large intestine 2,555 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_266 Large intestine 3,841 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_267 Large intestine 1,916 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_268 Large intestine 4 NA T1T2T3 View NA
CRC_41986711__CosMx_SMI__FOV_27 Large intestine 567 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_271 Large intestine 379 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_272 Large intestine 353 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_273 Large intestine 180 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_274 Large intestine 116 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_275 Large intestine 232 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_276 Large intestine 699 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_277 Large intestine 1,234 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_278 Large intestine 1,824 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_279 Large intestine 2,675 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_28 Large intestine 1,308 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_280 Large intestine 756 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_282 Large intestine 1,279 Ready T1T2T3 View
Manifest Domain summary
Interaction Propensity

Cell-type contact samples

350 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
CRC_41986711__CosMx_SMI__FOV_235 Large intestine 2,476 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_236 Large intestine 2,263 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_237 Large intestine 23 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_238 Large intestine 430 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_239 Large intestine 517 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_24 Large intestine 2,331 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_240 Large intestine 456 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_241 Large intestine 331 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_242 Large intestine 2,045 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_243 Large intestine 2,377 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_244 Large intestine 3,509 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_245 Large intestine 2,139 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_246 Large intestine 2,340 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_247 Large intestine 1,169 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_248 Large intestine 373 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_249 Large intestine 323 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_25 Large intestine 2,281 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_250 Large intestine 283 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_251 Large intestine 334 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_252 Large intestine 358 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_253 Large intestine 3,186 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_254 Large intestine 3,078 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_255 Large intestine 3,306 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_256 Large intestine 2,300 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_257 Large intestine 1,385 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_258 Large intestine 111 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_259 Large intestine 169 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_26 Large intestine 626 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_260 Large intestine 203 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_261 Large intestine 271 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_262 Large intestine 619 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_263 Large intestine 801 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_264 Large intestine 939 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_265 Large intestine 2,555 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_266 Large intestine 3,841 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_267 Large intestine 1,916 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_268 Large intestine 4 NA T1T2T3 View NA
CRC_41986711__CosMx_SMI__FOV_27 Large intestine 567 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_271 Large intestine 379 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_272 Large intestine 353 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_273 Large intestine 180 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_274 Large intestine 116 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_275 Large intestine 232 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_276 Large intestine 699 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_277 Large intestine 1,234 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_278 Large intestine 1,824 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_279 Large intestine 2,675 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_28 Large intestine 1,308 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_280 Large intestine 756 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_282 Large intestine 1,279 Ready T1T2T3 View
Manifest Pair summary
Network Topology

Graph-topology samples

350 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
CRC_41986711__CosMx_SMI__FOV_235 Large intestine 2,476 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_236 Large intestine 2,263 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_237 Large intestine 23 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_238 Large intestine 430 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_239 Large intestine 517 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_24 Large intestine 2,331 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_240 Large intestine 456 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_241 Large intestine 331 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_242 Large intestine 2,045 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_243 Large intestine 2,377 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_244 Large intestine 3,509 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_245 Large intestine 2,139 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_246 Large intestine 2,340 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_247 Large intestine 1,169 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_248 Large intestine 373 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_249 Large intestine 323 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_25 Large intestine 2,281 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_250 Large intestine 283 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_251 Large intestine 334 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_252 Large intestine 358 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_253 Large intestine 3,186 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_254 Large intestine 3,078 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_255 Large intestine 3,306 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_256 Large intestine 2,300 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_257 Large intestine 1,385 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_258 Large intestine 111 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_259 Large intestine 169 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_26 Large intestine 626 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_260 Large intestine 203 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_261 Large intestine 271 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_262 Large intestine 619 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_263 Large intestine 801 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_264 Large intestine 939 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_265 Large intestine 2,555 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_266 Large intestine 3,841 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_267 Large intestine 1,916 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_268 Large intestine 4 NA T1T2T3 View NA
CRC_41986711__CosMx_SMI__FOV_27 Large intestine 567 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_271 Large intestine 379 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_272 Large intestine 353 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_273 Large intestine 180 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_274 Large intestine 116 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_275 Large intestine 232 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_276 Large intestine 699 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_277 Large intestine 1,234 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_278 Large intestine 1,824 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_279 Large intestine 2,675 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_28 Large intestine 1,308 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_280 Large intestine 756 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_282 Large intestine 1,279 Ready T1T2T3 View
Manifest Topology summary