scAtria single-cell spatial atlas resource

CRC_41986711 · CosMx SMI / NanoString SMI

CRC_41986711 · CRC_41986711__CosMx_SMI

CosMx SMI / NanoString SMI Spatial transcriptomics Curated Tiered
Spatial analyses

Dataset sample manifest

Dataset-specific sample status for each public spatial analysis page.

201-250 of 352
Domains Interaction Topology Download sample CSV
Domains

Neighborhood-domain samples

350 ready Open page
Sample Organ Cells Graph ?Ready means a sample-level spatial graph exists for this published module output; it is not a biological quality score. Tiers ?Ready tier badges show which ontology levels have usable module outputs. Stale or missing tiers are not counted as ready. Open Downloads ?Manifest downloads describe sample-level availability. Module downloads contain the selected module result table, usually scoped to the first ready tier.
CRC_41986711__CosMx_SMI__FOV_283 Large intestine 3,621 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_284 Large intestine 2,404 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_285 Large intestine 1,099 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_286 Large intestine 300 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_287 Large intestine 94 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_288 Large intestine 649 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_289 Large intestine 2,574 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_29 Large intestine 2,592 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_290 Large intestine 1,676 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_291 Large intestine 3,354 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_292 Large intestine 1,285 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_293 Large intestine 985 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_294 Large intestine 4,596 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_295 Large intestine 3,719 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_296 Large intestine 1,982 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_297 Large intestine 1,439 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_298 Large intestine 520 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_299 Large intestine 91 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_3 Large intestine 235 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_30 Large intestine 3,345 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_300 Large intestine 290 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_301 Large intestine 2,401 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_302 Large intestine 2,840 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_303 Large intestine 4,542 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_304 Large intestine 1,719 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_305 Large intestine 2,701 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_306 Large intestine 4,163 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_307 Large intestine 1,694 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_31 Large intestine 675 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_310 Large intestine 24 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_312 Large intestine 83 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_313 Large intestine 2,471 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_314 Large intestine 3,087 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_315 Large intestine 3,682 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_316 Large intestine 2,035 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_317 Large intestine 907 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_318 Large intestine 2,990 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_319 Large intestine 1,627 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_32 Large intestine 1,414 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_320 Large intestine 313 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_321 Large intestine 772 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_322 Large intestine 801 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_323 Large intestine 300 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_324 Large intestine 24 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_325 Large intestine 808 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_326 Large intestine 2,304 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_327 Large intestine 4,236 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_328 Large intestine 2,644 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_329 Large intestine 82 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_330 Large intestine 1,606 Ready T1T2T3 View
Manifest Domain summary
Interaction Propensity

Cell-type contact samples

350 ready Open page
Sample Organ Cells Graph ?Ready means a sample-level spatial graph exists for this published module output; it is not a biological quality score. Tiers ?Ready tier badges show which ontology levels have usable module outputs. Stale or missing tiers are not counted as ready. Open Downloads ?Manifest downloads describe sample-level availability. Module downloads contain the selected module result table, usually scoped to the first ready tier.
CRC_41986711__CosMx_SMI__FOV_283 Large intestine 3,621 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_284 Large intestine 2,404 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_285 Large intestine 1,099 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_286 Large intestine 300 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_287 Large intestine 94 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_288 Large intestine 649 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_289 Large intestine 2,574 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_29 Large intestine 2,592 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_290 Large intestine 1,676 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_291 Large intestine 3,354 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_292 Large intestine 1,285 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_293 Large intestine 985 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_294 Large intestine 4,596 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_295 Large intestine 3,719 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_296 Large intestine 1,982 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_297 Large intestine 1,439 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_298 Large intestine 520 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_299 Large intestine 91 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_3 Large intestine 235 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_30 Large intestine 3,345 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_300 Large intestine 290 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_301 Large intestine 2,401 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_302 Large intestine 2,840 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_303 Large intestine 4,542 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_304 Large intestine 1,719 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_305 Large intestine 2,701 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_306 Large intestine 4,163 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_307 Large intestine 1,694 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_31 Large intestine 675 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_310 Large intestine 24 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_312 Large intestine 83 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_313 Large intestine 2,471 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_314 Large intestine 3,087 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_315 Large intestine 3,682 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_316 Large intestine 2,035 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_317 Large intestine 907 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_318 Large intestine 2,990 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_319 Large intestine 1,627 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_32 Large intestine 1,414 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_320 Large intestine 313 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_321 Large intestine 772 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_322 Large intestine 801 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_323 Large intestine 300 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_324 Large intestine 24 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_325 Large intestine 808 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_326 Large intestine 2,304 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_327 Large intestine 4,236 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_328 Large intestine 2,644 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_329 Large intestine 82 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_330 Large intestine 1,606 Ready T1T2T3 View
Manifest Pair summary
Network Topology

Graph-topology samples

350 ready Open page
Sample Organ Cells Graph ?Ready means a sample-level spatial graph exists for this published module output; it is not a biological quality score. Tiers ?Ready tier badges show which ontology levels have usable module outputs. Stale or missing tiers are not counted as ready. Open Downloads ?Manifest downloads describe sample-level availability. Module downloads contain the selected module result table, usually scoped to the first ready tier.
CRC_41986711__CosMx_SMI__FOV_283 Large intestine 3,621 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_284 Large intestine 2,404 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_285 Large intestine 1,099 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_286 Large intestine 300 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_287 Large intestine 94 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_288 Large intestine 649 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_289 Large intestine 2,574 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_29 Large intestine 2,592 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_290 Large intestine 1,676 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_291 Large intestine 3,354 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_292 Large intestine 1,285 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_293 Large intestine 985 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_294 Large intestine 4,596 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_295 Large intestine 3,719 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_296 Large intestine 1,982 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_297 Large intestine 1,439 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_298 Large intestine 520 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_299 Large intestine 91 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_3 Large intestine 235 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_30 Large intestine 3,345 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_300 Large intestine 290 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_301 Large intestine 2,401 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_302 Large intestine 2,840 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_303 Large intestine 4,542 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_304 Large intestine 1,719 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_305 Large intestine 2,701 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_306 Large intestine 4,163 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_307 Large intestine 1,694 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_31 Large intestine 675 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_310 Large intestine 24 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_312 Large intestine 83 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_313 Large intestine 2,471 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_314 Large intestine 3,087 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_315 Large intestine 3,682 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_316 Large intestine 2,035 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_317 Large intestine 907 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_318 Large intestine 2,990 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_319 Large intestine 1,627 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_32 Large intestine 1,414 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_320 Large intestine 313 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_321 Large intestine 772 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_322 Large intestine 801 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_323 Large intestine 300 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_324 Large intestine 24 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_325 Large intestine 808 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_326 Large intestine 2,304 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_327 Large intestine 4,236 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_328 Large intestine 2,644 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_329 Large intestine 82 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_330 Large intestine 1,606 Ready T1T2T3 View
Manifest Topology summary