scAtria single-cell spatial atlas resource

CRC_41986711 · CosMx SMI / NanoString SMI

CRC_41986711 · CRC_41986711__CosMx_SMI

CosMx SMI / NanoString SMI Spatial transcriptomics Curated Tiered
Spatial analyses

Dataset sample manifest

Dataset-specific sample status for each public spatial analysis page.

301-350 of 352
Domains Interaction Topology Download sample CSV
Domains

Neighborhood-domain samples

350 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
CRC_41986711__CosMx_SMI__FOV_51 Large intestine 2,770 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_52 Large intestine 2,816 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_53 Large intestine 435 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_54 Large intestine 639 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_55 Large intestine 3,869 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_56 Large intestine 3,327 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_57 Large intestine 335 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_58 Large intestine 724 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_59 Large intestine 482 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_6 Large intestine 373 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_60 Large intestine 999 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_61 Large intestine 1,250 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_62 Large intestine 1,414 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_63 Large intestine 906 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_64 Large intestine 1,868 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_65 Large intestine 2,178 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_66 Large intestine 1,416 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_67 Large intestine 817 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_68 Large intestine 2,025 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_69 Large intestine 1,020 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_7 Large intestine 4 NA T1T2T3 View NA
CRC_41986711__CosMx_SMI__FOV_70 Large intestine 1,543 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_71 Large intestine 1,975 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_72 Large intestine 2,430 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_73 Large intestine 2,420 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_74 Large intestine 3,222 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_75 Large intestine 2,022 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_76 Large intestine 342 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_77 Large intestine 929 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_78 Large intestine 2,158 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_79 Large intestine 3,068 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_8 Large intestine 360 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_80 Large intestine 2,938 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_81 Large intestine 2,964 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_82 Large intestine 3,147 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_83 Large intestine 3,512 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_84 Large intestine 3,119 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_85 Large intestine 3,273 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_86 Large intestine 2,689 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_87 Large intestine 210 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_88 Large intestine 1,184 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_89 Large intestine 2,156 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_9 Large intestine 416 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_90 Large intestine 2,041 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_91 Large intestine 2,908 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_92 Large intestine 3,098 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_93 Large intestine 3,103 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_94 Large intestine 2,985 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_95 Large intestine 3,538 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_96 Large intestine 3,556 Ready T1T2T3 View
Manifest Domain summary
Interaction Propensity

Cell-type contact samples

350 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
CRC_41986711__CosMx_SMI__FOV_51 Large intestine 2,770 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_52 Large intestine 2,816 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_53 Large intestine 435 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_54 Large intestine 639 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_55 Large intestine 3,869 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_56 Large intestine 3,327 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_57 Large intestine 335 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_58 Large intestine 724 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_59 Large intestine 482 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_6 Large intestine 373 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_60 Large intestine 999 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_61 Large intestine 1,250 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_62 Large intestine 1,414 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_63 Large intestine 906 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_64 Large intestine 1,868 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_65 Large intestine 2,178 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_66 Large intestine 1,416 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_67 Large intestine 817 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_68 Large intestine 2,025 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_69 Large intestine 1,020 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_7 Large intestine 4 NA T1T2T3 View NA
CRC_41986711__CosMx_SMI__FOV_70 Large intestine 1,543 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_71 Large intestine 1,975 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_72 Large intestine 2,430 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_73 Large intestine 2,420 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_74 Large intestine 3,222 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_75 Large intestine 2,022 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_76 Large intestine 342 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_77 Large intestine 929 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_78 Large intestine 2,158 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_79 Large intestine 3,068 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_8 Large intestine 360 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_80 Large intestine 2,938 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_81 Large intestine 2,964 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_82 Large intestine 3,147 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_83 Large intestine 3,512 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_84 Large intestine 3,119 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_85 Large intestine 3,273 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_86 Large intestine 2,689 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_87 Large intestine 210 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_88 Large intestine 1,184 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_89 Large intestine 2,156 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_9 Large intestine 416 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_90 Large intestine 2,041 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_91 Large intestine 2,908 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_92 Large intestine 3,098 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_93 Large intestine 3,103 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_94 Large intestine 2,985 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_95 Large intestine 3,538 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_96 Large intestine 3,556 Ready T1T2T3 View
Manifest Pair summary
Network Topology

Graph-topology samples

350 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
CRC_41986711__CosMx_SMI__FOV_51 Large intestine 2,770 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_52 Large intestine 2,816 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_53 Large intestine 435 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_54 Large intestine 639 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_55 Large intestine 3,869 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_56 Large intestine 3,327 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_57 Large intestine 335 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_58 Large intestine 724 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_59 Large intestine 482 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_6 Large intestine 373 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_60 Large intestine 999 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_61 Large intestine 1,250 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_62 Large intestine 1,414 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_63 Large intestine 906 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_64 Large intestine 1,868 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_65 Large intestine 2,178 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_66 Large intestine 1,416 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_67 Large intestine 817 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_68 Large intestine 2,025 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_69 Large intestine 1,020 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_7 Large intestine 4 NA T1T2T3 View NA
CRC_41986711__CosMx_SMI__FOV_70 Large intestine 1,543 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_71 Large intestine 1,975 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_72 Large intestine 2,430 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_73 Large intestine 2,420 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_74 Large intestine 3,222 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_75 Large intestine 2,022 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_76 Large intestine 342 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_77 Large intestine 929 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_78 Large intestine 2,158 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_79 Large intestine 3,068 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_8 Large intestine 360 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_80 Large intestine 2,938 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_81 Large intestine 2,964 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_82 Large intestine 3,147 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_83 Large intestine 3,512 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_84 Large intestine 3,119 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_85 Large intestine 3,273 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_86 Large intestine 2,689 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_87 Large intestine 210 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_88 Large intestine 1,184 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_89 Large intestine 2,156 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_9 Large intestine 416 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_90 Large intestine 2,041 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_91 Large intestine 2,908 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_92 Large intestine 3,098 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_93 Large intestine 3,103 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_94 Large intestine 2,985 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_95 Large intestine 3,538 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_96 Large intestine 3,556 Ready T1T2T3 View
Manifest Topology summary