scAtria single-cell spatial atlas resource

CRC_41986711 · CosMx SMI / NanoString SMI

CRC_41986711 · CRC_41986711__CosMx_SMI

CosMx SMI / NanoString SMI Spatial transcriptomics Curated Tiered
Spatial analyses

Dataset sample manifest

Dataset-specific sample status for each public spatial analysis page.

1-50 of 352
Domains Interaction Topology Download sample CSV
Domains

Neighborhood-domain samples

350 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
CRC_41986711__CosMx_SMI__FOV_1 Large intestine 59 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_10 Large intestine 459 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_100 Large intestine 712 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_101 Large intestine 942 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_102 Large intestine 1,196 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_103 Large intestine 1,415 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_104 Large intestine 2,059 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_105 Large intestine 2,445 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_106 Large intestine 2,595 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_107 Large intestine 3,326 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_108 Large intestine 3,165 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_109 Large intestine 3,496 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_11 Large intestine 271 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_110 Large intestine 3,462 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_111 Large intestine 3,579 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_112 Large intestine 3,274 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_113 Large intestine 2,318 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_114 Large intestine 181 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_115 Large intestine 1,377 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_116 Large intestine 1,550 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_117 Large intestine 2,194 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_118 Large intestine 2,396 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_119 Large intestine 2,347 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_12 Large intestine 1,368 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_120 Large intestine 2,525 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_121 Large intestine 3,005 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_122 Large intestine 3,430 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_123 Large intestine 3,207 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_124 Large intestine 2,960 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_125 Large intestine 2,896 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_126 Large intestine 2,890 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_127 Large intestine 900 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_128 Large intestine 45 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_129 Large intestine 1,040 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_13 Large intestine 692 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_130 Large intestine 1,884 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_131 Large intestine 2,470 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_132 Large intestine 2,573 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_133 Large intestine 2,455 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_134 Large intestine 2,263 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_135 Large intestine 2,154 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_136 Large intestine 2,475 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_137 Large intestine 2,811 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_138 Large intestine 2,040 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_139 Large intestine 57 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_14 Large intestine 765 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_140 Large intestine 969 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_141 Large intestine 1,189 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_142 Large intestine 2,333 Ready T1T2T3 View
Manifest Domain summary
CRC_41986711__CosMx_SMI__FOV_143 Large intestine 2,620 Ready T1T2T3 View
Manifest Domain summary
Interaction Propensity

Cell-type contact samples

350 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
CRC_41986711__CosMx_SMI__FOV_1 Large intestine 59 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_10 Large intestine 459 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_100 Large intestine 712 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_101 Large intestine 942 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_102 Large intestine 1,196 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_103 Large intestine 1,415 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_104 Large intestine 2,059 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_105 Large intestine 2,445 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_106 Large intestine 2,595 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_107 Large intestine 3,326 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_108 Large intestine 3,165 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_109 Large intestine 3,496 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_11 Large intestine 271 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_110 Large intestine 3,462 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_111 Large intestine 3,579 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_112 Large intestine 3,274 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_113 Large intestine 2,318 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_114 Large intestine 181 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_115 Large intestine 1,377 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_116 Large intestine 1,550 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_117 Large intestine 2,194 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_118 Large intestine 2,396 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_119 Large intestine 2,347 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_12 Large intestine 1,368 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_120 Large intestine 2,525 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_121 Large intestine 3,005 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_122 Large intestine 3,430 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_123 Large intestine 3,207 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_124 Large intestine 2,960 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_125 Large intestine 2,896 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_126 Large intestine 2,890 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_127 Large intestine 900 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_128 Large intestine 45 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_129 Large intestine 1,040 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_13 Large intestine 692 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_130 Large intestine 1,884 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_131 Large intestine 2,470 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_132 Large intestine 2,573 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_133 Large intestine 2,455 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_134 Large intestine 2,263 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_135 Large intestine 2,154 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_136 Large intestine 2,475 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_137 Large intestine 2,811 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_138 Large intestine 2,040 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_139 Large intestine 57 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_14 Large intestine 765 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_140 Large intestine 969 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_141 Large intestine 1,189 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_142 Large intestine 2,333 Ready T1T2T3 View
Manifest Pair summary
CRC_41986711__CosMx_SMI__FOV_143 Large intestine 2,620 Ready T1T2T3 View
Manifest Pair summary
Network Topology

Graph-topology samples

350 ready Open page
Sample Organ Cells Graph Tiers Open Downloads
CRC_41986711__CosMx_SMI__FOV_1 Large intestine 59 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_10 Large intestine 459 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_100 Large intestine 712 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_101 Large intestine 942 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_102 Large intestine 1,196 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_103 Large intestine 1,415 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_104 Large intestine 2,059 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_105 Large intestine 2,445 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_106 Large intestine 2,595 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_107 Large intestine 3,326 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_108 Large intestine 3,165 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_109 Large intestine 3,496 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_11 Large intestine 271 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_110 Large intestine 3,462 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_111 Large intestine 3,579 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_112 Large intestine 3,274 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_113 Large intestine 2,318 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_114 Large intestine 181 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_115 Large intestine 1,377 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_116 Large intestine 1,550 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_117 Large intestine 2,194 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_118 Large intestine 2,396 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_119 Large intestine 2,347 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_12 Large intestine 1,368 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_120 Large intestine 2,525 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_121 Large intestine 3,005 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_122 Large intestine 3,430 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_123 Large intestine 3,207 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_124 Large intestine 2,960 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_125 Large intestine 2,896 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_126 Large intestine 2,890 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_127 Large intestine 900 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_128 Large intestine 45 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_129 Large intestine 1,040 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_13 Large intestine 692 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_130 Large intestine 1,884 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_131 Large intestine 2,470 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_132 Large intestine 2,573 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_133 Large intestine 2,455 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_134 Large intestine 2,263 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_135 Large intestine 2,154 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_136 Large intestine 2,475 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_137 Large intestine 2,811 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_138 Large intestine 2,040 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_139 Large intestine 57 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_14 Large intestine 765 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_140 Large intestine 969 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_141 Large intestine 1,189 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_142 Large intestine 2,333 Ready T1T2T3 View
Manifest Topology summary
CRC_41986711__CosMx_SMI__FOV_143 Large intestine 2,620 Ready T1T2T3 View
Manifest Topology summary